>ycf27 [gene=ycf27] homologous to ycf27 in Porphyra purpurea
MRIENKQNKRQHHLLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIFTTHSIDLII
LDVMMPKLDGYGVCQEIRKESDIPIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEA
RIQSILRRIQTRNAKLKPYDNINLFKTGSLNIDLEKKQIYKNNELIRLTEMEFSLLELLV
SQSGKAFSRSKILKEVWGYKLSKHEPIADTRIVDVHISRLRAKLEDDPTNPTLILTARGT
GYLCRKLIT
>psaA [gene=psaA] [prot=Photosystem I p700 chlorophyll A apoprotein A1]
MNQILKEKEQKTAKILVDRNPVPTSFEKWGVPGHFSRSLAKGPKTTTWIWNLHADVHDFD
SHTSSLEDISRKIFSAHFGQLSLIFIWLSGMYFHGARFSNYTIWLSNPSLIKPSAQIVWP
IVGQEILNADLGGGSQGIQITSGFFHLWRASGITNELELYVTALGGLFMAGLMAFGGWFH
YHKAAPKLEWFQNVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINKLLDAGVDPKTIPLP
HEFILNRELMSQLYPSFEKGLWPFFSLNWGAYSDFLTFRGGLNPITGSLWMSDIAHHHLA
ISVLFIVAGHMYRTNWGIGHSIKEILDAHRGPLTGSGHRGLYEALTTSWHANLAINLALF
GSLSIIVAHHMYAMPPYPYISIDYPTQLSLFTHHTWIGGFCIVGASAHGAIFMIRDYVPS
QHYNNVLDRLIRHRDALISHLNWVCIFLGTHSFGLYIHNDTMRALGRSQDMFSDTAIQLQ
PIFAQWIQSLHTLAPANTAPNALATTSYVFGGEVVAVANKIAMMPMKLGTADFMVHHIHA
FTIHVTLLILLKGVLFARNSRLIPDKANLGFRFPCDGPGRGGTCQVSSWDHVFLGLFWMY
NCISVVIFHFSWKMQSDVWGTVSQNSLVSHVVGGNFSQSAITINGWLRDFLWAQASQVIQ
SYGSSISAYGLMFLAAHFIWAFSLMFLFSGRGYWQELIESIVWAHSKLKIAPTIQPRALS
ITQGRAVGAAHYLLGGIATTWAFFLSRAISIG
>psaB [gene=psaB] [prot=Photosystem I p700 chlorophyll A apoprotein A2]
MATKFPKFSQSLSSDPTTRRIWYGIATSHDFEAHDNVTEENLYQKIFASHFGHLAIIFLW
TSGNLFHVAWQGNFEAWIANPLKVKPVAHAIWDPHFGQAALKAFSRGGVNYPVDISYSGV
YHWWYTIGMRTSSDLYAGALFLLVLAALCMFAGRLHLQPKFKPSISWFKNNESRLNHHLS
GLFGLSSLAWCGHLIHVAIPASRGQHIGWNNFLTTPPHPAGLKPFFTGNWSDYSLNPDDP
SHIFGTSSNSGKAILTFLGGFHPQTQSLWLTDIAHHHLAIAVIFIIAGHMYRTNFGIGHN
IKDILEAHKPPSGKMGLGHKGLFNTISNSLHFQLGLALACLGVLSSLTAQHLYSIPPYAF
ISRDFVTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPKQNKDNVLYRMLEHKEAIIS
HLSWVSLFLGFHTLGLYVHNDVVVAFGNPEKQILIEPIFAQWIQATSGKTLYGFNVLLAS
SSSSATQAAQSLWLPNWLEAINNNNNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALD
ARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLGVFWMLNTIGWTTFYWHWKHIT
IWQGNASQFNESSTYLMGWFRDYLWLNSSPIINGYNPYGMNNLSVWAWMFLFAHLVWATG
FMFLISWRGYWQELIESLVWAHERTPLANLITWKDKPVALSIVQARLVGLVHFSVGYVLT
YAAFVIASTAGKFN
>rps14 [gene=rps14] [prot=30S ribosomal protein S14]
MAKKSVIQRNINRLKLINKYSAQREAIKNEIKRTSKVEKKISLYSNISRLPRDSSKVRLR
SRCWVTGRGRSVYKNFGLSRHMFRFMASNGLLPGVVKSSW
>hisH [gene=hisH] [prot=N-acetyl-glutamate-gamma-semialdehyde dehydrogenase]
MKNIGIINCGMGNLHSVSNAISNIGFNPVIINASKDLVSFACSALVLPGVGSFDLAIDRL
EKKNLIEPVKLWIQEDRPFVGICLGLQLLFEGSDEGSKPGLKIFNGYVSQFKHSLVKKVP
HMGWNKLYFNRFNTIDNLVPHYFHYDLQPWAYFVHSYYIEPKDCYTFNTTSLTFYGKQKI
VSSISYNNILATQFHPEKSGLFGLFILKRFLSSY
>petG [gene=petG] [prot=Cytochrome b6-f complex subunit 5]
MVEVLLTGIVLGSIFITLLGLLAAAKLQYNRKKTN
>psbK [gene=psbK] [prot=Photosystem II protein K]
MIINQLPETYNIFAPIIDIMPVIPILFLLLAFVWQAAVGFR
>ycf9 [gene=ycf9] homologous to ycf9 in Porphyra purpurea
MSILLQFFIISIIFFSLILVILVPSQLSLQSGWQVSKSRFIALFTIWASMILISGFISVF
V
>psaD [gene=psaD] [prot=Photosystem I reaction centre subunit II]
MQQSLNLKMPSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLL
YLAKKEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKID
HNIGKNLNPAEVKFTHKTIF
>ccrf8 [gene=ccrf8]
MRTGLFILINLLLFFVLMNIYFYYNICNVISYIAIINQYLIY
>ccrf7 [gene=ycf44]
MDLAITLSSSLITVLILFLNSQDNSSNALTHSQKNINDFQDNKLRIELLIWLLCITFLGL
LLIKAKIQQSL
>petM [gene=petM] homologous to ycf31 in Porphyra purpurea
MSQEIVTVSLIISILVLSGLTMGFILLKIQK
>ycf6 [gene=ycf6] homologous to ycf6 in Porphyra purpurea
MNISLVDLTWACLMVSFTVSLALVVWARNGF
>ccrf6 [gene=ccrf6]
MFFKYLNKYKRLTKLVELDLIQAICQAY
>ycf59 [gene=ycf59] homologous to orf349 in Porphyra purpurea
MVLNANHLQTKKTIKETLLAPRFYTTDFDEISRYDISSNFEEIEAIVNEFRSDYNKKHFI
RDEEFDRHWSQIDAQTKQMFVEFLERSCTAEFSGFLLYKELARKLKEKMPVLAEGFLLMS
RDEARHAGFLNKAMADFNLTLDLGFMTKNRRYTFFKPKFIFYATYLSEKIGYWRYITIYR
HLEKHPEHRIYPIFKFFESWCQDENRHGDFFAAIVKSQPYLLEGFISKLWCRFFLLAVFA
TMYLNDCQRGEFYKSIGLDPRQFDIYVIQKTNESAAKLFPTVLDLDNPRFFECLDKCACY
NKLLLEIDDREQPFFNQVLNVFYKFYLYFLLVLNFIMLYFLRTVNCNSFTRMVK
>rpl35 [gene=rpl35] [prot=50S ribosomal protein L35]
MNIRKNSKSVSKRFKVTSNKLILYKPASKSHLQEKKTVSRKKRLCRVKRIKVVDSKSIKL
RYMF
>rpl20 [gene=rpl20] [prot=50S ribosomal protein L20]
MVRVKRGNVARKRRKKILKLASGFKGAHSKLFRVANQQVNKSLRYSYVGRKLKKRRFRRL
WILRLNAASREEGLNYSKLVNSLKLLRIQLNRKSLSQLAMIDNDAFKRLVASSRV
>preA [gene=preA] [prot=prenyl transferase]
MKVNSKTLQSVKEDLLNIEQTLNKLIKVNNPILSAAAKHLLIVESKKIRPAIVLLVAKAI
DKNKKIKTSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSVNKTFGNKIAVFAGDFLF
AQSSWYLANINNLEVVKAISKVITDLAEGELQQNLTQFNTYYSIIKYLEKSFNKTASLIA
ASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGKMTTSDLKLGNL
TAPVLFALTKNSKLFKIIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIEAAINSIK
DLPTSSEKDSLIEIAYDLLNRYK
>odpA [gene=odpA] [prot=pyruvate dehydrogenase E1 component, alpha subunit]
MPNRQDCNLEANKISSQLALTFYYDMLLGRGFEDACAQMYYRGKMFGFVHLYNGQEAIST
GVIKSLKTTDYVCSTYRDHVHAISKGVPPRSVMAELFGKETGCSRGRGGSMHLFSSFHRF
LGGFAFIGEGIPIALGSAFKSMYSQQVCKSVQELDVTVCFLGDGATNNGQFFECLNMAGL
WNLPVIFVVENNQWAIGMHHRSTSQVEIYKKAAAFGINSCEVDGMDVVAVHKTAKEAILK
ARKGDGPTLIEALTYRFRGHSLADPDELRSKNEKDIWISRDPIKNFQSYVIRNKLLSQKQ
LIKVKDEVTQTINDALQFAIISPEPKLQDLHKYVFTH
>odpB [gene=odpB] [prot=pyruvate dehydrogenase E1 component, beta subunit]
MSMMFLYEALRAAIDEEMGKDSNVFIVGEDVGHYGGSYKVTKDLHVKYGDLRVLDAPIAE
NSFTGMAIGAAMTGLRPIVEGMNMGFMLLAFNQISNNLSMLQYTSGGNFNIPVVIRGPGG
IGKQLAAEHSQRLESCFQSIPGLQIVACSTAYNAKGLLKSAIIEKKPILFLEHVLLYNLK
GFVPDEEYYLPLDKAEVVRSGSDVTIVTYSRMRYHVLAAVEKLVLNGQDPEIIDLISLKP
LDLHTISKSIKKTHKIVIVEECAQTGGIAAELISLINTYLYDELDSPAVRLSSKDVPIPY
NGNLEKSTLIQPDQIVDVVTNLLQYKT
>petA [gene=petA] [prot=cytochrome f]
MKHTNSKQKLKDIINFCQAIFTLCIICLYQANISNSYPIYAQQTYENPRESTGRIVCANC
HLAQKNIYIEAPKEVLPNTVFETVVKIPYEFNKKQILGNGSKGDLNVGAVVILPEGFKLA
PKDRMDEKLLKKTKNLYFNNYSQKLDNIIVIGPITGKDNQEITFPILAPDPQINKNTHFL
KYSIYVGANKGRGQLYPSGEKSNNNPIPSNAEGRIEKIKPNEDGGYEVIIKTKDDETISQ
YVPIGLNLTIKEGQRIKAGEYITTDPNVGGFGQSEIEIVLQNPTRLISFIFFSISVLISQ
LFFVLKKKQFEKVQSLNQNF
>ycf43 [gene=ycf43] homologous to orf254 in Porphyra purpurea
MADKKANDSFQMSIYEHLEELRQRSIESIVALLISMVVCSLNINILIELIKQPAIGIKFL
QLSPGEYFFTSIKITLYLGIILSSPIIFYEIIIFIIPGLTKKERRLLIPILIASGCLFVA
GLIFGYIYITPIAVRFFINYGKDMIEPIWSFKEYFDFIILSLFSTAISFQIPIFQILLGS
LKIINSKMMLSVWRYVVVGSTIFSAIITPSTDPLIQLFLSVAVMFLYFSSILVLKLFKL
>apcE [gene=apcE] [prot=phycobilisome linker polypeptide]
MGLRTSSGSPLVKPKLYKTSASNVISLAEKQDRFLNLGELTDLNTYFSSGNRRLDIAKVI
SLNANLIISRAADRIFVGGSPLSFLERPQAAVTLTSDQASSTSIQSTKGLGNGNIFQNFF
KSTSEAPTGFKPINVVRYGSSNMKKSIRDLDWFLRYVTYAIVAGDTSILIVNTKGLRELI
DKACSSSAAIVALKEMKNVSLSLFNYDIESQNIVRLYFNTLVSEFESPASSSKVRKRNSL
DLQGLAIPDIYLVAADKSLRYVMKPNLSNTEKAQVIKACYRQVFERDIAKAYGLSLLELE
SKLKNLQISVKEFIRALGKSTLYRKNFYEGFTNSRVVELAFRHFMGRGLSSLQEFRKYFA
ILSSNGLDALIDSIINNSEYAEYFGEETVPYIRGYGQEAQECRNWGSQFALFKYSAPFRT
IPQFITLFADYTQLPPSQHCYGKLNDPLNIQFGAIFKNSYVNEQSRPVLFPRGSRRILVY
KGAGIFNQLGSPNALEKPPSNVSIAKWSKETDLNFILNAAYLRVFGRYVYEEEKIALRPL
ENEFKRRSISVRDFVGQLAKSDVFRSLYWSRLYICKSIEYIHIRLLGRPTYGRTEINNYF
DIVYKSGFYAFVDSLVNSREYIKCFGNDTVPYDRYSTPEAVSSSIFRLSFINSVSYKSLK
PKIEKFIQLGVARDAKSLSSLNSKVFQGVSQARSQKRVFKVSDYSNVMNLRIVFYAALRQ
VFERNIEPYIKGGEFKDIESLFLSGKISVRELIKEIGSSSLYRKEFYIPFPNTQVIEFCT
KHFLGRAPKNQSEIRYYNQVLAVQGLREMINYMINSKEYLSVFGDDIVPYRRFPTLPAAN
FPNTQRLYSRQTKQNRNIVVPSFSGLLNTV
>apcA [gene=apcA] [prot=Allophycocyanin alpha chain]
MSIVTKSIVNADAEARYLSPGELDRIKSFVMSGQRRLRIAQILTDNRERIVKQAGQQLFQ
KRPDIVSPGGNAYGEEMTATCLRDLDYYLRLITYSVVAGDVIPIEEIGLVGVREMYNSLG
TPLSGVAEGIRSMKSVVSGLLAGDDAAEASFYFDYAIGAMQ
>apcB [gene=apcB] [prot=Allophycocyanin beta chain]
MQDAITAVINAADVQGKYLDNNSIEKLRSYFQTGELRVRAAASISANAAGIIKEAVAKSL
LYSDITRPGGNMYTTRRYAACIRDLDYYLRYATYSMLAGDPSILDERVLNGLKETYNSLG
VPIGATIQSIQAMKEVTASLVGPDAGQEMGVYFDYICSGLS
>dfr [gene=dfr] homologous to ycf26 in Porphyra puurpurea
MRKFHKLYIHTNIGGQFQTINLLVFIISLLISTSISLFVNSLNNNATVIKEATIHDILAL
INSDFNLHREALVNQRLQSTFFCQTLYASITEFESLAVFSHEGLLYCVPSFNSKDVNKIE
DNFQFSYLNLLQKMFRLNIHFPLIHTSLKGYGRYLTQAFVILNMANRDQPMLFVEVEFTS
NFFYWPLQLFSLVFLMTWFIILLGGILNSLTIIKPIKELLAGIRNISTGNFEQKIFLPFE
GQIGELIFSFNNMAERLKNYDYKSKEELSSAKAKAEVLVSTIADGAILLNDKLEIILINS
KAKEIFNCEFLDLLGVGIDRFLPKNLQSSVMPSLKHLAKSTHVDFLPVVLSGLDLVFPAK
GRRKIKIFLNQVLSKSNNKVLGISLIIRDITQEVELSLAKNYFISNISHELRTPLFNIKS
FVETLEDYDRILTRKQKLSFLKTIHKEADRLTRLVDNLLNLSAIKPKQNNFLHSFYLFNL
RILIYDTILPYQIKLQNKKIITYVELENGLPEIFANYDLLFQAVSNLINNAIKFSYIGSL
ISIRVFTLKKRQVGGVSIVRVEISDSGIGIDMSRSSEVFERFSRIDNKSYALQGTGVGLF
LAKNIIEQHHSRILMHSQLSYGSTFFFDLTF
>argB [gene=argB] [prot=acetylglutamate kinase]
MNNKSIRTQILIEALPYIQQFRGAIFVIKYGGAAMKDLISKERLIADIVFLSCIGLKLVC
VHGGGPEINFWLNKMNVESKFHDGIRITDELTMQVVEMVLAGKINKELVSLLNNKGVKGV
GLCGKDGTILTARKAQCGSIDMGLVGEIKSVDPYLILTLLKENYIPVIASVGADETGKTY
NINADFVAGEIAASLGAEKLILVTNTSGILADVSQPESLIRDTNIMQLRQLLSRGIISKG
MIPKVNCSIRSLAQGVRAVHIIDGTKPHSLLLEVLTNNGIGTRFLYKQSILLQLNCFSFS
NVSI
>dnaK [gene=dnaK] [[prot=Hsp70-type chaperone]
MEKIVGIDLGTTNSVIAVMEMGKPAVIPNSEGFRTTPSVVAYAKNGDLLVGQIAKRQAVI
NPSNTFYSVKRFIGRKFEEINEENRQVTYQVNKDPSGNVKIYCPFKNKDFTPEEISAQVI
RKLTEGASKYLGEKITKAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLAYG
LDKKNNEKILVFDLGGGTFDVTILEIGDGIFEVLSTSGDTHLGGDDFDKKIVDWLVDEFK
KSYNIDLSKDKQALQRLTEAAEKAKIELSSVSQTEINLPFITATSEGPIHFDKSLNRAKF
EELVSELIARCKIPVENALKDAKLNKSDINEIVLVGGSTRIPAIQNLVKESLQKDPNQTV
NPDEVVAVGAAIQGAVLAGEVKDILLLDVCPLSLGVETLGGVMTKMIPKNTTIPTRKTEI
YSTAVDNQTNVEIHVLQGERELAKDNKSLGTFRLDGIPPAPRGVPQIEVTFDIDANGILS
VTAKEKTTGKQQSVTITGASTLDKDEIQKIIKEAEINAQEDRKKKENIELKNQAETICYQ
AQKQLNEFKEKIDKNQYKRIEDLIAKLKQAISSNEYEEIKNLMEAIQKETMEIGKELYSK
DSKNTKNSDVIDADFSET
>rpl3 [gene=rpl3] [prot=50S ribosomal protein L3]
MKNVDFCTFGVKLGMTQILDNFGNLVPVTIVSQPKPCVITRVTTSLNSQQKLIIQIGCYS
DFRANKPTIGYFKKQSVPNLRYLHEFQTYKNNEYQVGKSLDLKELDQQLVQVSAYTIGKG
FAGYQKKHKFSRGAMSHGSKSHRRPGSIGAGTTPGRVFPGVKMAGRLGFSRRSIKNLLVL
KVDLTNKLFLLKGSVPGKYGNLLLVSLKKTNYFLD
>rpl4 [gene=rpl4] [prot=50S ribosomal protein L4]
MKFMVTEQKTLIYPVINLITGQHNYIGFKCRISTNNANYVVHRVFSIQNKLSREHTASTK
TKSQVRGGGKKPWKQKGTGRARAGSIRSPLWRGGGVVFGPKPKNVFFKINKKEIRLALYT
VLSNALPKTTVVSSLEGLPNFISTQALIKFLRSLNVSLDNRVLIVVEKKETPLFLSCRNI
KNLALIQADHLNVKSVILAQSLVVTLQALKIIYKTFNDN
>rpl23 [gene=rpl23] [prot=50S ribosomal protein L23]
MAKIISSELPDLILSSVITDKTIKLLETKNYTFLAPKEVSKIAFKRAIEDMFKVKVNSIN
SLNLPNKKKRVGRYKTGSLPLYKKMIVKLDSKDTIDLFLDR
>rpl2 [gene=rpl2] [prot=50S ribosomal protein L2]
MAIKKYKPYTPSMRGRVLASDFFDLSEKKAPKRLSFGIKSISGRNNQGKITCRHKGGGHK
RKYRLVDFKRCKTGVLAKVSDIYYDPNRSAHIALLNYLDGEKSYIISPNLLKVGTYVVSG
KEASPDIGNALPLNCVPLGFEIHNIELIHGKGGQVARAAGTSAKLIAKSQDYVTIKLPSG
EIRLFRGECYATIGKVGNIDHNNEKIGKAGRNRWLGIRPTVRGSAMNAVDHPHGGGEGRS
PIGRSQPSTPWGRPALGIKTRRNKFSNFYILRRRK
>rps19 [gene=rps19] [prot=30S ribosomal protein S19]
MSRSIKKGPYVHFKLLKNTNNLNLSNSKRVIKTWSRSSVILPSMVGHTIAVHNGKIHVPI
FISDQMVGHKLGEFAFTRSFRSHAKIDKKIRK
>rpl22 [gene=rpl22] [prot=50S ribosomal protein L22]
MKATIRFIKISPTKVRRITNQIKGLKYADACILLKFMKGRIAKTILKLVNSAFSNSRYST
FADLRIQTVLVEKGPIFNRFQPRAKGRAYPIKKYTSHIKVVLS
>rps3 [gene=rps3] [prot=30S ribosomal protein S3]
MGQKINPLSFRLGINKLHHSSWFARPQSYTAILQEDKKIRDYIFTNLLRASISRIQINRQ
FNQVELQLHTSRPGVIIGRSGTGIDSLKRNVKNLLSKQSQLKINIIDVTNPDIDAVLLAC
FISQQLESRTTFKRAVRQAIQRAQKSDIPGIKIQVSGRLNGAEIARTEWIREGRVPLQTL
KADLDYATSSAYTSFGVVGVKVWIFKG
>rpl16 [gene=rpl16] [prot=50S ribosomal protein L16]
MLSPKKTKYRKFHRGRLKGHATKGSALAFGRYGIQALTSSWITSRQIESVRRVIVRHLKR
GGKLWIRIFPDKAVTAKPLETRMGSGKGSPEHWIAVVKSGHILFEIDGVSLELAKEAVKL
AIYKLPIKCKFLSNDEFAKD
>rpl29 [gene=rpl29] [prot=50S ribosomal protein L29]
MSLPKIKESQDLTISDLQRETSSVRKSLLILRLKKSARQQIKPHLFIHLHHKLSQLLMLQ
SIKSKYK
>rps17 [gene=rps17] [prot=30S ribosomal protein S17]
MSAKEIIGIVITKSLDKTAIVKTQSKSSHERYVKIIKKVKKYTVHDRENISRVGDKVIIL
QTRPLSKTKRWVIKSIL
>rpl14 [gene=rpl14] [prot=50S ribosomal protein L14]
MISVHTRLKVIDNSGGKEIMCIRVLGTNRKYATLGDVIIGVVKNAVPNMPVKKSDVVRAV
VVRIKKTINRKNFFSVRFDDNAAVIIGSDGNPKGTRIFGPVARELRDKNFSKIASLAQEV
V
>rpl24 [gene=rpl24] [prot=50S ribosomal protein L24]
MINVRVINKKRRIQKYKVSVKSGDTIKVISGKYKNIVAKVLRVLKYSNEIIVKGVNIKIK
HIKPVRDNEMGSLKSLEFPINISKVVLLESRKKE
>rpl5 [gene=rpl5] [prot=50S ribosomal protein L5]
MSGGNLQHLYFNKIRVELQKQFEYTNVHQIPKLTKITLNRGLGTLYQQSPKVFESSVSDL
MLITGQKPRFNKSKKSIAGFKLREGTVVGLSVTLRRKKMYAFLEKLIHFSLPAARDFRGL
STKNFDGLGNYNLGIKEHAIFPEIDFDKIDHSYGLNICIVTTANNDIEGKALLKFLGMPF
KD
>rps8 [gene=rps8] [prot=30S ribosomal protein S8]
MVNDSISDMLTRLRNAICAQHKVVQVPLTNINKNILKVLQKEGYIKNFEILFERKSGYLL
VSLKYNSLNQDKPCLSVLKKISRPGLRMYVRTKKIPKVLGGTGIAIISTSKGVMTGSIAR
NLGIGGEILCYIW
>rpl6 [gene=rpl6] [prot=50S ribosomal protein L6]
MSRIGKKSILLNQNVQVDIKDQVCIVKGQKGTLQRKLPCNVELIKRGPELFIIPVDLDTV
KKRRLHGLLRTLINNMVIGVSIGFSKKLEIHGVGYKAHIADQHLVLTLGYSHVIKFLPPE
GVSLLVENNNIVLVKGIDKEKVGLASACIRSIKPPEVYKGKGIRYAGELVRRKLGKASKN
Q
>rpl18 [gene=rpl18] [prot=50S ribosomal protein L18]
MRYRLLVHLSNNHVYAQIIDDLNNRTVLSVSTLTPQVKSKLSITCNKKAAELVGEYVAQQ
ALNFGIRNVVFDRGRKLYHGKVEVLANSARSFGLKF
>rps5 [gene=rps5] [prot=30S ribosomal protein S5]
MSRDTSANSSGQQNYTWSERVIQITRVTKVVKGGKKLSFRAIIVIGNNQGSVGVGVGKAS
DVIGAVKKGVSDCKKQIIEFPLTSSSTISHAVEGRFGAASVILKPSVQGSGVIAGGAMRT
VIELSGIKNIVAKQLGTKNHLNNAKATINALSKLNSKSSQLSLMSFSN
>secY [gene=secY] [prot=Preprotein translocase subunit]
MRPENNLRLRLFQTMKFIALERLGLFVPIPGIDQKLFSSDYSNNAISNLLNVFDNNQAPK
LSVFALGIIPYINATITIQILSSAFPALKKLQSEEGEIGKKKLNKITKYLSFCFAFIESL
AIVLRLQKYAFDWNLYFIVQTTLILISGAMLVMWLADNISYKGIGTGASVIIFVNIASAF
AKFLLNQLFVHSIKFLDFASYFALIVFSIACIVFVQEAIRKVPIISAKQLDSTSFYSNDY
FLPLRINQGGVMPIILASSLLALVDYVIRYGLSTLQAVYFINDILPFKILFLLLYSAFII
FFNYLYCSLVLNCFELSNNLKKASVVIPSIRPGKMTEKFFKDTLDNLTLFGSGFLAFIVL
APNFLEFVFHIRVFKGLAVSSLLIVVGVAIDLIKQSKTYVIAKNYENMVH
>rpl36 [gene=rpl36] [prot=50S ribosomal protein L36]
MKVRASVRKICSRCVALKRHGVLIVLCSNPKHKQRQG
>rps13 [gene=rps13] [prot=30S ribosomal protein S13]
MVRIAGRELPTNKRVDIALNYIYGIGPWRSRQILKELKVDFSTRVKDLLVGEIAAIREYI
ERNYVVESDLRRFELLNIKRLIEINSYKGKRHKMLLPVRGQRTRTNARTRRGVKRIIDLK
GV
>rps11 [gene=rps11] [prot=30S ribosomal protein S11]
MLKQSKKSSKKLKKSVIDGLIIINSTFNNTIVTATDCYGKVIAWASGGTEGFKGAKKGTP
FAAQSATEKLIKALLEQGTQRIHISVSGPGPGRETSIRSFQTSGLQIISIKDITSVPFNG
CRPPKKRRI
>rpoA [gene=rpoA] [prot=DNA directed RNA polymerase alpha subunit]
MLGKVNGVQIECLESMVINSREIYGKFMIEPLSYGQAITVGNALRRVLLSDVPGVTIVSV
RIAGINHEFSTVKGVKEDVLEILLNLKNIVLKGNVLKNQIGRLKVQGPAIVTSGQIEFPL
DITVVDPCQYIATISGNDYLEMELKVEKSSGYKLVETFSKKSPLDFLPIDSIFMPVKKVN
YYVEEILDSKVAYEKLILELWTNGSLSPQQSINYASDNLVKLFNPLRVLDFSKESSSVYE
QNSLIKQKLIEELCLSVRAYNCLKRVQVDSIGDLLEYSIGDLLEIKNFGQKSVEEVSKAL
YKKFGVKLKH
>rpl13 [gene=rpl13] [prot=50S ribosomal protein L13]
MKNPIRMQKDYKLPVWYLIDAQDQILGKIATKAAIILMGKNRSTYSYNSMSANFVIIINS
RQVAITGNKNTQKVYKRYSAKPGATKTESFYHLKKRIPNRILEQAVKGMLPKSVLGKKMF
SHLKVYAGDSHPHLAQQPIQLSI
>rps9 [gene=rps9] [prot=30S ribosomal protein S9]
MLSYSTGRRKCAVAQLRFFSGNGKIVVNGCSLDYYFQHNSAFTKIIRSPLKLLNLELLYD
FIIVVKGGGLSGQAGAIRLAIARVLAGLSPSNRSSLKSKRYLTRDSRIKERKKYGLKKAR
KAPQFSKR
>rpl31 [gene=rpl31] [prot=50S ribosomal protein L31]
MAKKNIHPQWYEEAKFYCNGEIVKIIGSTRMEINADIWSGNHPFYIGTQKIVDTEGRIDK
FIRKYNLNSENSESL
>rps12 [gene=rps12] [prot=30S ribosomal protein S12]
MPTIQQLIRFERKQIVGTSKSAALESCPQKKGVCTKVYTTTPKKPNSALRKVARVRLTSG
FEITAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGALDSTGVKNRLRARSKYGAS
KPKK
>rps7 [gene=rps7] [prot=30S ribosomal protein S7]
MSQKDPYKTYRLVSDPFYESPLVTLLIMHVLRNGKKSISQRIVYSAIENIAMKVKEDPLE
IIERAIKNVIPAVEIRSRRIGGSTYQVPTEVRVHRGISLSIRWVIKFAKIRPGKSMSLKL
ANELLDASKNLGNSIRKKEDTHKMAEANRAFAHYRY
>tufA [gene=tufA] [prot=elongation factor Tu]
MARAKFERSKPHINIGTIGHVDHGKTTLTAAISAVLASIDNTVKLKKFDEIDAAPEEKAR
GITINTSHVEYQTPLRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREH
ILLAKQVGVPSIVVFLNKADMIDDEELLELVELEVRELLSKYDFPGEEVPFVAGSALLAL
EACLKNPTIGKGKDKWVDKIFELMDMVDKYFPTPERDIDKTFLMAVEDVFSITGRGTVAT
GRIERGAIKVGETVEIVGLKSTASTTVTGLEMFQKTLDEGLAGDNVGVLLRGVQKQDIER
GMVLAKPGSITPHDKFEAEVYVLNKEEGGRHTPFFPGYRPQFYVRTTDVTGNISQFTTDD
GGSAEMVLPGDRIKMTVELIHPVAIEQGMRFAIREGGRTVGAGIVSKILD
>rps10 [gene=rps10] [prot=30S ribosomal protein S10]
MVRPLNDFHEAKVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLR
SPHVNKDSREHFEIRSHFRIIDISSCSSETIEMLMRLDLPTGVNIEIKT
>petF [gene=petF] [prot=Ferredoxin]
MTSYKVKLTNEKEGIDVEINCPNDQYILDAAEEQGIDLPYSCRAGACSTCAGKLISGTVD
QSDQSFLDDEQIKEGFVLTCVAYPTSNCTILTHQEEALY
>petJ [gene=petJ] [prot=cytochrome c553]
MEKQIMFKNIIIVVAVTLCALFTNEHVVYSANLEHGEQIFSANCAACHAGGNNVIMPEKT
LKAEALEANNIKNISAIANQVKNGKNAMPSFSRLSDSDIEDVANYVLSKADKGW
>psbV [gene=psbV] [prot=cytochrome c550 (oxygen-evolving complex component)]
MNRISIYRIKVLAFLFAVSTYVYPASSLELNEEARTVKLNSEGQSLTLNEEQIKKGKRLF
NSHCGSCHVGGITKTNPNVGLDLESLNGANPPRNNINALVEYMKDPKTYDGSESIAEIHP
SIKSADIFPKMRDLSDDDLKVIAGHILVQPKINSEKWGGGKIYY
>accD [gene=accD] [prot=acetyl-CoA carboxylase carboxytransferase beta subunit]
MPNGTKLAKSFLWKKCDSCNILISKFDFYKHDKVCPECNYHFPMYSSERINHIIDLKSWI
PLYNNLLSGDPLGFCDKKPYITRLAENQKITGLDEAVQTGIGRINNISASVAVMDFNFMG
GSMGSAVGEKITRLVEFSTKEELPIVIISASGGARMQEGILSLMQMAKISAALERLQSKG
LLYISILSSPTTGGVFASFAMLGDIILAEPKAVVGFAGKRVVEQTLNEKLPPNFQSAEYL
LDNGFVDLIVKRKQLKKTIHMILDLHN
>apcD [gene=apcD] [prot=Allophycocyanin gamma chain]
MSFVSKTIIEADHELRYLNGAELEILRAYLNSSEKRIKVIKTLRDREKEIISKASRKLFQ
IHPDYIGPGGNASGSRQRALCLRDYGWYLRLITYSIIAGDKNPVERIGLLGVRDMYNSLG
VPLIGMVDSIQCLKDAALAELKSEEEVKLAEPYFDFVIQNMAQ
>psaF [gene=psaF] [prot=Photosystem I reaction centre subunit III]
MKSKVLQRFVLCITASLLFWNLNIATHASTLTPCENSAQFQARLNNNIKKLENKLTYYKQ
NSQEYTSIKQQIEKTKIRFDKYAKSSLLCGEDGLPHLITDGDWQHSGEFFIPSVLFIYIA
GWIGWAGKGYLQYSKTLTKPNENEIIIDLPRALKYMFSGFAWPILALKEFKNGSLLASND
EITTSPR
>psaJ [gene=psaJ] [prot=Photosystem I reaction centre subunit IX]
MDKNLLKYIYTVPVISTLWLLLTAGILIEINRFYPDALFYAF
>ycf52 [gene=ycf52] homologous to orf174 in Porphyra purpurea
VLIVNYINRWLCSSIFLKDLQFTYDKVLFIRVNKESFRLIIQSQGNLNLNLDQLNSLCSL
VGWDKRPLGKLKKVIIESFQVFIISSTLSGAEELLGFARVTSDSAFFAVIWDFLIHPKFQ
KRGLGTLLILEIIKELKKKEIIHIFLFADIKAINFYKRIGFSSHLKTGKAMFWHP
>ycf37 [gene=ycf37] homologous to ycf37 in Porphyra purpurea
MVLAKVYLYQSKFEKAAPKFEKISKKYQNELTKELQSQIFNSLGMCYFNLNDLELSTHYY
LKSIEINNNCTATLNNLARIYEKKKLFCEAKNIYLRVLAINPKNYIARKNLTRLNSRDSR
I
>trpA [gene=trpA] [prot=tryptophan synthase alpha subunit]
MKNSIKNIFESERGLLLLPFVSLGTPNTQINKQAIIAMDKNGANIIELGIPYSDPVADGP
VIQDAYNKAIKNGVNIRKAFKILMNLKGKIKSPIIVFIYYNQLLNYGINKFLEKLIQLEV
QGIIVPDLPYDESQILKKKCTINNIALISLIALTSSFSRIKKIARNAEGFLYLISKTGVT
GGTGKLMNKLKIIIKTIQKLTSKPVVVGFGINSRRQIKQLIEWNSNGIVIGSPCVQILLQ
SSKEVCVIKLSGLIKQIKESTSSTSN
>ycf62 [gene=ycf62] homologous to orf327 in Porphyra purpurea
MKVTILHQKFIRFVYLLDLELIKRKFVLGLSGGQDSLALLKLLCDYRKTYFGLLKLVYCD
HRWRLESIANAQRLYYLSEYSNISFYYFATSTFLSSETQSRTWRYKNLLKISLSFEYSYL
LTAHTLSDISETTIYRLVRNLRISEINNLLFTFLYIKKTLSISRPLASVTRNDTYWLCSL
SYLPLWSDYTNYWLFLSRNRIRQELFPYLKNYFNCSLERYLDGFIYSNKINLITLNIKLK
KILSKIFGYTNDGLYFNVSLFKLLPFFYQHILIRDFHFLFFHNYRSPSQFNRLLFAIALE
KSQKVFIRKQYHII
>ycf12 [gene=ycf12] homologous to ycf12 in Porphyra purpurea
MLNWQVIVQLVFLALIITTGPVIIVYLSTRERNLL
>ycf16 [gene=ycf16] homologous to ycf16 in Porphyra purpurea
MKETSVLTIQNLKACVNEFEVLHNINLQIKTNETHVIMGPNGSGKSSLLKVIAGHPSYKV
IEGKIFVENIDITQATPEERSNLGVFLGFQYPIEITGVNNADFLRAVYNQKRKKQGLKDL
DPLEFLEILSPILDLVSMDQTFLHRNLNEGFSGGEKKRNEILQMILSKPRLAILDEPDSG
LDIDALRSISEVINKLRNQKQCMLIITHYQNLLDYVIPDKVHIMDHGKIVETGDVTLAIQ
LKRKGYKWIKQSTN
>ycf24 [gene=ycf24] homologous to ycf24 in Porphyra purpurea
MIDRKKSSNIQNILNKPYKYGFSTEIQSEEFPKGINEEIIRLMSHKKQEPDFILKFRLKA
YQIWKKMQAPDWGHLHHNEINFNDVLCYASPKLEQGKNKAQTISEEILATFEKLGVPIKP
NNKQPKIAVDAVFDSISFGTTLQKELKEQGIIFCSISEAIKAYPNLIKKYLGSIVPAGDN
YFAALNSAVFTDGSFCYIPKNIRCPVDLSTYFRINNKEAGQFERTLIIADENSFVNYLEG
CTAPQFDTNQLHAAVVELICFKNATINYSTVQNWYAGNNKGEGGVYNFVTKRGVCQGENS
KISWTQLETGSAITWKYPSCLLKGKRSTGEFFSVTLTNNAQEADTGTKMLHFGRQSKSLV
ISKGISGGVSKNTYRGLVKISGSAIYSDNRSQCDSLLIGKGSESNTYPNLHVHNSLSKVE
HEAFVSRIGEEQIFYFQQRGINIEEALNMIVSGFCQDVCNKLPMEFALEANKLLNIKLEG
SIG
>lpxC [gene=lpxC] [prot=UDP-3-0-acyl N-acetylglucosamine deacetylase]
MYNYTIYHPVKISGRGLYTGINSTITIYPELPHVGIYFLRTDLTDYPIVPIIPSTLL
VLNSKLSTVLGFHDDYSIMLIEHLMSAISLSQLTDLKIILEGPEIPILDGSSIIWLKLLQ
QAKIYITSLSNCIIFKSSCTFFIQTKDTFIISFPYTSLAINTGIDFKNCLAIKSQWITIL
DLLINRFELVGIASSRTFGDFNQINILINEGFFQGANLYNALAFQLGNWCNGPLRFICEP
AKHKVLDLIGDLRLLGVYNMFFLIGYKTNHFVNSQLVQFFKKLDK
>lpxA [gene=lpxA] [prot=acyl-UDP-N-acetylglucosamine o-acyltransferase]
MTNIHSTAIVHPAASLGRNVVVGPYSIIGSDVSIGDYTRIGPHVVITGKTVIGCNNQILS
GCILGSVPQDLRYIDSELTGLYIGNNNLIRENVTVHRASGNGVTYIGNNNLIMVNCHVAH
DCQIRNNIIISNSVSLAGHVIIDSCVIIGGHAGLHQFVHVGALSMIAAMSKIEKNVLPFV
VVSGMPAITRTINLVGLKRYGISKTDINYIRLMLENLKVQPLAFDTYSIFKKFKSDNLLK
RNVAVQYFSDFLFNSFRARGFIPFKVPKK
>psaM [gene=psaM]
MITDSQVFIGLVIALVPAILAFKLGLSLYE
>thdF [gene=thdF] [prot=thiophen and furan oxidation protein]
MYKRDTIAAIATCPNGGGVSILRLSGSKSIDVVKTVSLVSSNQCWHSHCILYGWIKDNED
QSFVDEVLILLMMAPRSYTAENVVEIHCHASIVLANEILRILVKQGVRLAKPGEFTMRAF
LNGRIGLSQVESVLKVIHSKTIASAKLAANTLRRGGSERIRRLKHTLSLLLADLEFHIDF
SDEFIDVDSIEDELRSTIQSSLLDIKDLISSYNKVSKLNEGTKVCIIGKPNVGKSSLLNA
IAKRECSIVTNFPGTTRDIVSFETMLGNTLVRLYDTAGIRQSVDEIEKIGISKTELFVDE
CQIVFFVLDAIQGLSSEDSVIFNKLNLMNKNFVILINKIDKKVQRKIDEIYETLKCSNRR
IIEVSAIKNIGLEKLNNCILDLSSKEDFDLPVHFSVNCKYLEILNNIYLILDELYTGSLN
KSVTSYDFIAVELRRVLQGLNQITGDEVVENNVLDAIFSKFCVGK
>chlI [gene=chlI] [prot=magnesium chelatase subunit]
MTSTADVFDKKDQFNFVFPFTAIVGQEEMKISLLLNVVDPKIGGVMIMGDRGTGKTTTIR
ALVDILPDILVVKDDPYNSHPHDVDLMSSEVQALVLNRMNIETCYTKVPLVDLPLGATED
RVCGSIDIEKALSEGKKSFEPGLLAKANRGLLYVDEINLLDDHLVDVLLDCSASGWNLVE
REGISVKHPSKFVLIGSGNPEEGELRPQLLDRFGLHAEIKTVKDPELRVKIVEERTEFDK
DPVAYIRKFSKSQDELREKIINAQNLLPKVEMPRELKFNISKICGILDIDGLRGDIVTNR
ASKAYAAIQQRNVVEIGDIQKVIVSCLRHRLRKDPLEIIESGEKIQKAFTNIF
>infC [gene=infC] [prot=initiation factor 3]
MLGGELLKYKSSKESHILINENINFPCVRVVDVTGKQLGILDTRQAVEYAKNQGVDLVLV
NEISDPPVCKLIDYGKHKFIVEKRVKEGRKKQSGALVKEVKMTYKINEHDYETRLNQAFK
FLKSGNKVKVTLTFKGREIQHLSLGTMLLNRLMTDLQQIAEVKRSPYQDGKTMILILTPK
IVDPQ
>ycf85 [gene=ycf85] [prot=ABC transporter; putative] homologous to slr0251 in Synechocystis sp.
MNMRLFAYDINKKIATRQILDGVTLSLKQGEIIGLLGPNGSGKSSLFSIMAGIEKPSSGA
IYINHCDITKYEISERSGLGISYLPQESILLINLSVAQNLLAAMEGRKFSYAEKLKKIKY
VLDLFKISSLANNLCSSLSGGEKRKVEIAKSVVNNPFFLFLDEPFSGVDPMSISEIRRLI
QTLSLSNLGIVITDHNVSEVLQTIQRGYILFSGKLLANGSRHELFANEEVRKKYLGYDYD
THNI
>ycf84 [gene=ycf84] homologous to slr0882 in Synechocystis sp.
MALLLSELLKITTQLIQYFIDFTILDSYLFKSLVLPFLFCWVSFVFIELSVGCVNQLMSD
LSSGLPLEISLQILLLYLPLYAYFALPITSFFSGLISFRIKNYSNQLLGVYITSISFSRL
FRSVLIFTSAICGTTWCISEIIIPVSSNSLQVLHRKASLCARNSICSETSSGIFTNYYNS
QSKKAPLKELKGVLYIKHFNHLNAYQLIYLDFNNENLKQLFLADSAKFDHFSRNWLFENM
HIFSFDYDKELFVDSFNINMNLCNLSILDLKLNAVINKSQFSPFWMNAASIKMYKELSHL
KTYSKSWRKLSLRLYQKYFTPISSIFLYSTGALMGSFRYKTQYLSFFIGILIAFQFYLST
FVTESAVILGIIPIYFSFIVPTSLTVILLLVLRRISL
>ilvH [gene=ilvH] [prot=acetohydroxyacid synthase small subunit]
MKYTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQKGISRITMVVPGDDRTVEQL
TKQLYKLVNILKVDNITEIPCVERELILVKINASTSSRPEILSILQVFRAKVVDLSENLL
VLELTGDPGKVAAIQQLLQKFGIIEIARTGKIALTRTSKVNTEFLKSISMEI
>CfxX [gene=cfxX] [prot= rubisco expression protein]
MGITPTALEKTDKHTLVNLQEEFNKTKIQEVLDDLNQELIGLKPVKNRIREIAALLLVDR
LRQKVGLSSSNPGLHMSFTGPPGTGKTTVATKMADILYKLNYIKKGHLVTVTRDDLVGQY
IGHTAPKTKEVLKKAMGGVLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQREDLVIIF
AGYKEKMDKFYASNPGLASRVANHVDFPEYRPEELLKIAEMMLQEQQYQLTKEAELVFLD
YIKKRMLQPHFANARSVRNAIDRARMRHANRIFNLSSKIVTKSNLTTIQAEDILKSRLFN
T
>rbcS [gene=rbcS] [prot=Ribulose bisphosphate carboxylase small chain]
MWGLPLFDVKDPAAIMFEVEACRKEKSNYYIKLLAFDSTKGVESTAMSFMVNRPAHEPGF
VLRRIESNDRVQRYQIHSYATEKPEGERY
>rbcL [gene=rbcL] [prot=Ribulose bisphosphate carboxylase large chain]
MAQSVQERTRLKNKRYESGVIPYAKMGYWDPNYVVKDTDILALFRVTPQPGVDPIEASAA
VAGESSTATWTVIWCDLLTACDVYRAKAYRVDQVPNSPDQYFAYIAYDLDLFEEGSIANL
TASIIGNVFGFKALAALRLEDMRIPIGYLKTFQGPATGVVVERERLNMFGKPFLGATVKP
KLGLSSKNYGRVVYEGLKGGLNFLKDDENINSQPFMRWRERFLYVMEGVNRASAATGEIK
GSYLNVTAATMEEMYNRAACAKEVGSIIIMIDLVIGYTAIQSMAIWARENNMILHLHRAG
NSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPIIVKGFYNTLLLPKLDVN
LPQGLFFEMDWASLRKTVPVASGGIHAGQMHLLLKYLGDDVVLQFGGGTLGHPDGIQAGA
TANRVALEAIVLARNEGRDYVNEGPQILKEAARTCGPLQTSLDLWKDISFNFTSTDTADF
VETPTANV
>trxA [gene=trxA] [prot=thioredoxin]
MPSPIQVTDFSFEKEVVNSEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINT
DENPSISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL
>rpl28 [gene=rpl28] [prot=50S ribosomal protein L28]
MVNLHYKKIYSYKMQCHIKVRISTKAIKLLKKNKIEKILKTSHLSIKQKFIK
>ycf80 [gene=ycf80] homologous to orf450 in Porphyra purpurea
MFPNIVNLKIWPVELAYSSLNKDFVSLSAEKEINNKIEETIESHCLKKQGIRIRSPYGLR
TLKVLQACPKKEDLVLQRGCIKIALPFSGILSSYQSKCQYMQGLNNHLRNTLNNVVVYVV
TNSSDELVSVASRSLMYRGRGISLVDLIIDLYYRYFVLDKYNLTNVVGFVFMDYEDSNLF
LRTVLQNCYDKDKKAAVQKLKLGEACKLFFNPLNGIKVRFIPSSKELEKLFSVYQNEFDH
ISLHADQRFTPNSYSGVPVYLVSNKWLTNKSLVTLNPSLSTLLSHDFVFFTYLDALKFCN
IIEDLLLYGNKEVESKPSIVLFNFEEILLHLKDVASLQTKVHFLPPYSVCDNEKLILAEL
KKVGSSTNPASTTWEYLSVILNSDLNNKN
>rps4 [gene=rps4] [prot=30S ribosomal protein S4]
MSRYTGPKIRIIRRLGELPALTTKKVKNNYPPGREWSTNEELSEYAIRLQEKQKIRFNYG
INEKQLRRYVKKAKKSRGSTGSYLLNLLEMRLDNIVLRAGLAPTIAASRQLVSHKHIEVN
NKIVNIPSFQCSIGDTIHVKKSNKSRQLIDLNSRRDTTKFFPKYLEVNKDNMGARVVKTM
DKQDVNLTINELLVVEFYSRKG
>ccrf5 [gene=ccrf5]
MSRDITGVFLFTFAPWLDNCCISLWHFPVNDRLGITQLLMSLTKSPDFPQVVKLN
>rps16 [gene=rps16] [prot=30S ribosomal protein S16]
MIKIRLKRYGKKNRPTYRIVLIESQKPRDSKTIEELGHYDPLLKQANFKFDEIMKRVGQG
ARLTSRVRYILKQFS
>ycf65 [gene=ycf65] homologous to orf99 in Porphyra purpurea
MTYYYFWPRTDAWEQLKIELDSQPGLFAKDKVVILNQVTRIIDYWQENKKSVFPNLSELQ
SHFPDLICSGCY
>groEL [gene=groEL] [prot=60 kd chaperonin]
MSKRILYKDQARKALERGIDVLAKAVSITLGPKGRNVVIDKKYGAPQIINDGIAIAKEIE
LKNHMENTGVSLIRQAAAKTNDVAGDGTTTATVLAHAIIKQGLKYVSTGSNPISLKKGIE
KASQFIIQKISENSRPIEDVKSIIQVSSISAGNDEEIGSMIANAIQKVGKDGVISLEEGK
SAITELEITQGMKFEKGYISPYFITNSEKMEVVLENPYILMTDKKITLVKEDLLPVLTLI
NKTNRPLLIIAEDVEKEALATLVINKLRGIVNVVAVRAPGFGDRKKALLEDIAILTNGQV
ISEETGLNLETITLDVLGQARRATILRDSTTIVEDKNQQAVHARCEQLKNQLLIAKSSYE
KEKLQERLAKLIGGVAVIKVGAATETEMKEKKLRLEDSINATKAAIEEGIVPGGGTALVH
ISANLKQWAKINLSSDELLGANIVEQASLAPLHKIAENSGKNGSLIVEALEHKNFEIGYD
ALSNSLVDMYDAGIIDPAKVTRSAIQNAASIASMVLTTECVIVNRDKKNN
>psbW [gene=psbW] [prot=Photosystem II protein W]
MAKIQFIKGIDEQTVPEIRLTRSRDGNTGTAIFSFINPTVFLLHSSSQNYGEITGMYLQD
DEGELSTRNVTANFVNGKPKAVEAVYLIRNKSGWDRLMRFINKYAEDKNMSFYKS
>ccrf4 [gene=ccrf4]
MFVMITITCQLSIDLINPEFHANEAR
>ycf40 [gene=ycf40] homologous to orf71 in Porphyra purpurea
MTNVKTSIRINVNGKPWVCFSNTTLNELINNLRLDKSLIAIERNKKVVSPSLWSKTYLDN
DDTIEIIAIVGGG
>ompR [gene=ompR] [prot=regulatory component of sensory transduction system]
MIFKILVIDDENIVCDAIYSYLVEKGFQVSTCQNAWQAISILTREFFHLIILDIMMPQID
GYQFISLLRIKRPNLELPLILLTAKALTLDRIRGYETGCSIYLSKPFDPDELIAIINNLI
KRHYKLKRPKKSYKLLKKQNVGIKPIKLTEKEQCILNLIAQGVVNKKIKKLTFIGARYVE
NYVSKMLKKSQSNNRSELVIKSIKNKIVI
>ntcA [gene=ntcA] [prot=global nitrogen regulator]
MVLLKTLCANHQDGILIYPKNSVIKIQGLCLLLSGILQHYNMSNHKKCQTLSLIFNWTFF
GSVVGSSDCKIQTKDFYKCVTDVRLLHFSLFELAEVVCSDSILHFDFFKIFNQRIKDIEF
FIVITSHKNIGNRLSHFILLLACYFGIFSAEGIFLNIYISQHDIASILSTTRSTITRLIN
QLRKDNIIRYYRKRLILLKPVKLGYYFSHFKRYI
>petB [gene=petB] [prot=Cytochrome b6]
MSKFYDWFQERLEIQLIADDISAKYVPPHVNVFYCFGGMTLTCFLVQLATGFAMTFYYKP
TTIEAFSSIQHIMTQVSFGWLIRSLHRWSASMMVLMMILHIFRVYLTGGFKKPRELTWIT
GVILAVLTVSFGVTGYSLPWDQVGYWACKIVTGVPEAIPVVGDNVVEILRGGTGVGQATL
TRFYSLHTLFLPALSVIFLLAHFLMIRKQGISGPL
>petD [gene=petD] [prot=Cytochrome b6-f complex subunit 4]
MTIIKKPDLNNALLRAKLAKGMGHSYYGEPAWPNDLLYTFPIVILGTITCCVGLAVLEPS
SLGEPANPFATPLEILPEWYLYPTFNMLRIIPNKLFGVISISLVPVGLGIVPFVENINKF
QNPFRRPIATSVFIFGTVTTVWLGIGATMSIDKALTLGIFF
>rpl12 [gene=rpl12] [prot=50S ribosomal protein L12]
MDKIDEIVEKIKLLSLLEASELVKRIEDTFQVNVSNIQPVTGLSSNLTTTQQTPESAEVK
EKWDVILENVPADKKIAILKVVRSITGLGLKEAKEFVESVPKIIKQSISQADAEHIKQQI
EDAGASVVLK
>rpl1 [gene=rpl1] [prot=50S ribosomal protein L1]
MVKIRSRRFKILQSQISVEKMCEPIEAINLLKSGPKAKFSETFEVHCCLDLNTKYSDQQL
RASVVLPKGTGKRTKIAVITNEAEVNKIKNFGVDIVGSKDLVESIANGFLEFDQLLTTPD
MMPVIAKVGKILGPRGLMPSPKSGSVTSDIYNAIQEFKKGKLEYRTDKSGIVHSIIGKID
FTAEDLLNNLIAIKKSIDQNRPNGAKGKYWKNMYLCTTMSPAIKIDFNKLQELEKNYGQN
>rpl11 [gene=rpl11] [prot=50S ribosomal protein L11]
MIKKIITTVKLALPAGKATPAPPVGPALGQHGVNIMMFVKEYNARTEEQKGSIIPAEIQI
YEDKSFTFILKTPPASILLKQATGIEKATKAPRREQVGSISYKEIQNIAKIKINELNTKD
LSKAIKIIEGTAKNMGISVET
>chlN [gene=chlN] [prot=protochlorophyllide reductase chlN chain]
MIHFFDILTDFDYRMYNRQMILPELGLNGQINIKKSRVLCVGAGALGASSLMYLCAAGFG
RLGIVDFDRVAISNLQRQIIHTYEAINTYKTFSAFNVLKQLNIHIKIDLYTTRLSSLNAV
KLISYYDLVIDASDNFETKCIINDTCQLLKKPMIYAAVLKFIGQISVFNYRGGPSYRTIC
SKLPDSREFASCSESGVIGALPGVLGSLQAIEAVKVIIGKGQVLSGGILTLDVFKMFIRI
FGIVFYKHLMSNNISTTLKSQEDKQRAAHNQELKIFRNILSLSLKDIDLILKMSRYRFKF
LLLDVRTQQEHINIRFLKSSILPYACLENVNKIQCIIPKFACRYDLIILYCQCKTRSLRA
ARALASYNTNLIIIRLHGGVSSAIDHINQMVVSTK
>dnaB [gene=dnaB] [prot=replication helicase subunit]
MKDSFNEYMKIGRLPYNLVVERVILGLIIEGSNPMVDKVKSLIKRSFFFARSHRAIYQAI
FYLYDNNKTIDWMSITFYLVIDTQTSFIIVYNLLKSVREEFARAEHRLALKSNDGAWLFL
VATLAEYEAKRNHLKALSGTKSKINDSSISFRKQLNVLQESVKNLTYGLPYSSNRVETWG
KDIKHCLNSFINELERKLRFEQIDEFLPTGFHQLDQLIGGFRRRDLIVVGGRPGVGKTIT
GLNLASKILQLRTDVTVLFFSSEMPLKDILVRFMIMHSTQDLSFFDLLSGNLNLEKLSTE
QENLGWADKLINLYVEDSFQIELSELRRISVVFKEQHPNLGLIVIDYLQIIRASQETDPS
TKLLQNMRSLQVAQIVESLKLLARQLNVPVVLLSQLSRNAESRPGKTQMLSDLSESGFIE
QQADVVILISQQQKISGFMTPPPQHKSVVVPFNLTVAKNRNGPTGEIHLGLYVKKMMLVS
IKSSLSGFN
>ccrf3 [gene=ccrf3]
MFLFNTLIISIIRLPLNISIGKTEQLIPIDISVILC
>clpC [gene=clpC] [prot=Clp protease ATP binding subunit]
MNIQPNTFFLKAMLTLLNIKGNNMCWAHKKNMFERFTEKAVKVIMLAQEEARRLGHNFVG
TEQILLGILGEGTGLAAKALKSMGITLKDARIEVEKIIGRGSGFVAIEIPFTPRAKKILE
LAIEESRILTHNYVGTEHLLLGLIKEGEGVAARVLENLGVDLPKLRSNIIRMIGETSEVS
VGATSGRSKVPTLEEFGTNLTQMAVEGKLDPVVGRAKEIERVVQILGRRTKNNPVLIGEP
GVGKTAIAEGLAQRIINNEVPDTLEDKKVITLDVSLLVAGTKYRGEFEERLKKIMDEIRM
ADNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLEEYRKHIEKDAAL
ERRFQPVMVEEPTVEETIEILRGLRDRYEAHHRLKISDSAIVAAAKLSDQYIADRFLPDK
AIDLVDEASSRVRLMNYKLPPSAEYLDEELRHIQKIKNELIRSGDFEEASQFREREIEVK
VQMAALMKAKKEAIEEELALNPPIVNEDDIANIVSSWTGIPVSKLTKSESEKLLHMEETL
HSRIVGQNEAVIAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKAMASYFFGSE
EAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRKRPYTVVLFDEIEKAHPDV
FNLLLQILEDGRLTDSKGRTIDFKNTLLIMTSNIGSKVIEKKGGGLGFELEENIEELQYS
RMRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVRDIAHIMLREIFERVKQQGISLQV
TERFKNLLIEEGYNPSYGARPLRRALVRLLEDSLAEEVLSGKIKEGDNAMIDVDENKQVK
ILLGNSNNQHAFLA
>rpl19 [gene=rpl19] [prot=50S ribosomal protein L19]
MVNYLSLKNNISSNLFSGHNNINQEPICVGDYIRFGLLITEGTKERTQNCEGLVIAKRFS
NTCCNLTVRTVFQGIGVERTISLFSPKISKIKILKHYKVRRAKLYYLRRKENVKKK
>ycf17 [gene=ycf17] homologous to ycf17 in Porphyra purpurea
MPKYGFHQSTELINGRLAMLAFILSLFIEFITEQKILHFLKFL
>menD [gene=menD] [prot=2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase]
MMDNIWSNAIVEELVRQKITYFFIAPGSRSTLLALAVANNKQSKSIVHFDERSIGYAAVG
FSKSFNTAAVIIVTSGTAVGNLLPCIIEASMSCIPLLVLSADRPYELKFCGANQSIDQNK
IFGNFTRWFFEIPPPEEKIKIKAIISAIDYACIKMKGDTPGPVHINCLFREPFFHDNKNH
NDTGLIYFREWIHSHEIFNIYTYLKSNSIAKKISIDLQRILNLRNGIIILGNIEDLQLVH
LINKISYLLDWPILPDILSRSRVHHLNDNFINYYNLILKRYTIESPEVVLQFGPRTVSKE
LDIYLSYDKCINFILIQDICNRFNVNHLRSNSLICNPKVFCLNCLTYLNNNKIKLEYKKR
KKWLSTWSNYNQIIHFSLCKYFSNFRILSEPAVVRSLLQHWPENYVGYLGPSMPIRDSDI
FCEGNTQDSTNSTINLYSNRGASGIDGNIGTSLGISVGTKQKVLSLLGDLSFLHDINSLK
VVDKLPDKPILVIYNNNGGAIFSFLQINNIHKDVLTKFFYAPHNLSTFEHIAYQFSLNYK
KIQNIYALVKLLNLYGNKNEAIILEIESSIKQNLSDHSLIDQYLKKLAFEEN
>menF [gene=menF] [prot=isochorismate synthase]
MNTSYKMKPIGLNKIKFNINILKTQKKYFYVIRIGIAIKRSKMNLISWLNSQQEFPKIYW
KNRNSKIEVASSKILALFYRFKHMISFGYLRGNTKMATRFYIIQPFMSSKNKNTLVTAWE
ELITKNITLPKIEIIKFCLSTYIGLNLLNKVERQQLNEIFTQEFVAYKNKIKSASSIRTI
TYSQCLKNWTNEIKQSFKHIKHNSLEKIVLARRKILEFETDLNSLSIIQQLKHKQYNSYN
FGLFINTNCGFIAFSPERLYKRKTNIITSEAVAGTRLRGRTQKHDLRLAFNLICSCKDFN
EINIVKQYLVNKTKNIGNIVKVQLHYSIMQTSNVQHLYSRLQAKLKSNMSDQKIIRNLHP
TPAICGSPQQAASKCIPLFENFYRTCYASPVGYFNTDNSSMKISIRSAFINKRKILIIAG
CGILNSSIVLKEWNEVENKMNNFNTIIES
>menB [gene=menB] [prot=naphthoate synthase]
MQTIAIKDFIDIKYIKQDQISEIIISRPQVLNAFRPRTINEIIAAFYDSREDSSIGVVIL
SGHGSRAFCVGGDQKIRSKTGYIDEKGRSSLNVLELQRIIRTFPKPVIAKVSGYAVGGGQ
ILNMMCDLTIASENAVLGQSGPKVGSFDAGYGSAYMARIIGQKKARELWFTCYQYDAFEA
YKMGLVNWVVKIEDLDSYAIKLATDILNKSPLAIRFLKSSLNADCDGQSGLQELAGYSTM
LFYMSAEGQEGHRAFLENREPDFSKFNS
>menA [gene=menA] [prot=menaquinone biosynthesis protein]
MLTKNVERFWCFFLASRFQTLLISISSLLFNLSFVYRQYQKIKLVYIILLLCLFVCLQIF
ANFTNDYFDEVSGVESKFRLGPKRFTLRLGSFIMHFYLSVSLLLITFILILLLLSVDYGS
IKHIIFSLMSSGLFICFVYSGGPFPLASLGLGEVLVFFVFGLLQTITFNFVNIASFHFNL
QNYLFSTSSGLLSAALLSVNNARDQIIDIQTLKRITLAARFGINFANFYYYSTIFLCIYL
FVYYIFLHTLIYATFLTLVFISINSWKLAKDALFLDRINFQLISLGSTSLFVFIYSFFIF
STLVLL
>menC [gene=menC] [prot=4-(2'-carboxyphenyl)-4-oxybutyric acid synthase]
MYLLNIKFFRYCVKFKSNVNNKKAKNINREGIVFKIIDLRNNTFIWSETAPLPYFSLDFL
KFSYFEILRFKQIIVSFTFLSWRRLFSNRNLFLKLSEEKIFPCLHCCITLGIYNLIRYRS
KRLVNIRKTTTRLNSLVNFNLLLLNKENNLNTFNQFGNSVIKFKLRNLTFIDVFINFTFL
VKYRNLCCSKKIRLDTNRTFSLEQNFYLFQRLALHNLDYLEEPINQVRDVFALISELNCP
TVLDELSRSFQSLAFDYSNLVGFVIKPSMMGSLRLILDLINLNFLTYKFSILSSIFETNC
SVINFLLLLIDLDLNLPVGFGNSNSLIDDFIVSSQELSIRDGYLFLYLSKNVIVNIKEVV
KLWF
>menE [gene=menE] [prot=O-succinylbenzoic acid-CoA ligase]
MVLTTSTILRWTYFYSLKASRNIVFTSSKSVLTYQEMDNYVQLLSFIFCYLNVKNKNLLI
LTSNTILSIALSFINIYSLNYLIFLSPKVSIQTVLRFIRTKNISALITNKGQSLFGLKQH
SAIRQISWTYFFTTRVALKLLRTYLLYKLLDCENLIVDCNIFNISFLTSGTTGNSKICWH
HFNNYTLGSAGTNKVQFFDHRSKNLLLLPFYHVGGFSVMFRSVIAGGALILFSLLKDPQL
LCLSFYLSYGRYLSMVDTQFYRLLHYPLLIKFVKVGKICVIGGSFFRWDSLASLDSKFNF
SSIFFHSYGLTEAFAQVFFIYFCSNKYYAIHLPYRQSRIRYDNQIVIRGRTLLKNCFIIL
IQAFVKGTQEPSINILSFSSALWFHTYDRVMMFEGGSLNVIGRVDNVFVRGGENISPEEI
ERELNSLRNVSNSLVVPVRYSQIGVISVAFIILSVFNFNISNFTRVISNRLEANKIPERL
IVLVGANSLSGKISRKLIARYLSN
>ycf83 [gene=ycf83] homologues to slr0204 in Synechocystis sp.
MKTLFRNSIELSLEEVDYAGVMYFGKIFLIAHKVFEKFLIKKKLPIATIISRTKYRLPIV
QARADYVRPIHLSDKIDIILYIEKIEISSFCLQYRFFVNQKQLSAIVKLKHVCLSQTLNQ
SIRLPKELLLQLFYTS
>ycf82 [gene=ycf82] homologues to slr1508 in Synechocystis sp.
MKLINLIIHIAWLGKRSPFCGNVTYSDNIITALESRGYKISFFHFSRVLFPSFNKLKDSF
LPCSYKSQVFTLPSFQASKIFLHNLSVINPHLLHASLTLSPLDFLLPDICRQAEIPLIAT
FHPPFISEESRLLTHSQFIVYKMYAPFLAHYSYVIVFSRLQKNFMISLGVSEKKLIIIPN
GVNNLTYLPSYPRLRSQFKVQTIFIYQGRVSKEKNLQDLLAAWVDAKMSIRAKLIILGNG
PILNHLVRNYSSIDGVIWIGSIQDYSKRIEILRKADVFILPSLVEGLSLSLLEAMSCGLT
CVLTDTGGDAEVADPNIGFVLSPANVYAQLRILLPLVVKHVEFRNVLSHRSETRFNQKYV
LQVNVLYLDFLYKILLSKIKQIIY
>ilvB [gene=ilvB] [prot=acetohydroxyacid synthase large subunit]
MNYKKNSLIKTGAFALIDMLVKHKVKNIFGYPGGAILPIYDELYHWEKKKLIKHYLVRHE
QSAAHAADAYARATNEVGVCLATSGPGATNLVTGIATAQMDSVPIIAITGQVSRAFIGTD
AFQEVDIFGITLPIVKHSFVVRDPRDISTIVSEAFYISKHGRPGAVLIDVPKDVGLEEFN
YHDYDSIRDHKPITKYRPIYGPSIRQIEKFKKMLLESKQPILYVGGGAVMSRAQHEIEEL
ASFIKIPVTTTLMGKGSFNEYNPLYLGMLGMHGTAYANFAVSECDLLIALGARFDDRVTG
KLDEFACNAQVIHVDIDPAEIGKNRIPQLAIISDIKIVLKELLSSMKEGTNNMDKNQTQA
WLHRIHKWKKEYPLSIPHDSKLLYPQEVINEISQIAQKAFFATDVGQHQMWAAQFLKVEQ
GKWLSSSGLGTMGYGLPAAIGAKIANPNDLIICITGDASFQMNLQELGTIAQYELDIKIF
IINNQWQGMVRQWQQAFYDQRYAHSNMAKGQPDFVQLANSYGIRGIRVTTSKDLKSKIER
IISTPGPLLIDCIVATSENCYPMIAPGKSNSQMLGLTKQLKTITN
>psbB [gene=psbB] [prot=Photosystem II p680 chlorophyll A apoprotein (CP-47)]
MALPWYRVHTVVLNDPGRLISVHLMHTALVSGWAGSMALYELAVFDPSDPVLNPMWRQGM
FVMPFMARLGVTDSWGGWSITGESVSNPGLWSFEGVALTHIVLSGLLFLASIWHWVYWDL
DLFRDPRTLEPALDLPKVFGIHLVLSSLLCFGFGAFHVTGLFGPGIWISDAYGLTGRIQS
VAPAWGPEGFNPFNPGGIASHHIAAGTVGILAGVFHLNVRPPQRLYRALRMGNIETVLSS
SIAAVFFASFVVSGTMWYGAASTPIELFGPTRYQWDSGYFQQEIEKRVEESLSNGLSLPE
AWSNIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGHELIVRRMP
AFFENFPIILVDKDGIIRADIPFRRAESKYSIEQVGVTCSFYGGKLNNQSFKDASTVKKY
ARKAQFGEVFEFDRTILDSDGVFRSSPRGWFTFGHANFALLFFFGHLWHGSRTLFRDVFA
GIGAEVTEQVEFGVFQKVGDKTTKKQGYV
>psbT [gene=psbT] [prot=Photosystem II protein T]
MEALVYVFLLIGTLVVIFFAIFFRDPPRIAKK
>psbN [gene=psbN] [prot=Photosystem II protein N]
MEKALILSIFIFSLLLGITSYSIYISFGPLSKTLRDPFEEHEE
>psbH [gene=psbH] [prot=Photosystem II 10 KD phosphoprotein]
MALKTRLGELLRPLNSQYGKVAPGWGTTPIMGIFMALFLLFLIIILQIYNSSLILENLDI
SWTTLGI
>psaE [gene=psaE] [prot=Photosystem I reaction centre subunit IV]
MIKKGSQVRILRPESYWHNEIGTVATVDQSGIRYPVIVRFDKVNYSGINTNNFAVNELVE
IQTNSYKAK
>ccrf2 [gene=ccrf2]
MIILITYNYFNYFLLTWFYNQFFKGTKNCYT
>ftsH [gene=ftsH] [prot=cell division protein]
MKKQWKKIVLFVLPVIITLITLSSFLFYNQDVVHNWSSSRMTYGRFLEYIDMNWVKKVDL
YDNARTAIVDIINPDIKGEEQLVRVELPTFSSELVSKLKNKLIDFDAHPSSSNVNLVSWL
SNLLLPLILIITLFFFFRRGNKSSSGPGQAFNFGKAKARFHMEAKTGIVFEDVAGIEEAK
EELQEIVAFLKDSRKFTNVGATIPKGVLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEF
VEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTE
MDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIH
KDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKIIAGLEGSPL
ADSRIKRLIAYHEAGHAVAATFLPHHDPVQKVTLIPRRQAKGLTWFLPNDDQFLVSKSQI
LSKIIAALAGRAMEEIVFGLPEVTIGAANDIKQVTFMARQMVTKFGMSKVGPICLENSSS
EVFIGRDLMGRHELSEEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKET
IEAKEFMRIVEERV
>acpP [gene=acpP] [prot=Acyl carrier protein]
MVTKEEILKKVQSIVSEQLGISKEQVLVDSHFTNDLGADSLDNVELVMAIEEEFNIVISD
IDAEKISNVREAVEFIIDKINNKANA
>ycf45 [gene=ycf45] homologous to orf565 in Porphyra purpurea
MLIFNDLRHFLPVVPRFVYKSLKKHPRKFGLTEIVLDNGRRAEGRWREKTENLTHKKITK
KHLLRCIKKIGIFNEDNRAGIYQTLHRISCIKNRYGNIVGLTYRIGREFIGIGPIIRDLI
ESNQSTLLIGRPGIGKTSFIREISRILSNEIMKRVIIVDSANEISGEGCCPHISTGKARR
MEVQSINSQHEVMIEAIENHTPEIIIIDEIGTEYESQAAISISQRGIRLIGSAHSSDLFN
LAKNPTLCKLVGGIESVTLSDTQAILRKTKKTILERKGCSCFNATIEINKKRTVKVYTSV
EQSIDAILEGRVNNSQIRSMKLNGEITISLNYQDE
>ycf86 [gene=ycf86] homologous to orf in position 85043-85240 in Porphyra purpurea
MLLSFNVGDVIRLSEILNRIPEEMMDYIGDKAIIKGKKILKNNIMVLLIEFKNYARIWVF
IKELN
>accB [gene=accB] [prot=acetyl-CoA carboxylase biotin carboxyl carrier protein]
MLHSSIYWKNLINTFESGCFSIAEVKFIFSNIHIYKNICNPYKNYQLPELARNLQSSKKL
DNAILKQDKKNIIDILSPISGIFYSSSKPGASPFVAVGSVVSKGQTLCIIEAMKTMNEIE
SDSIGKIHQICARNGDFVTKNQVLMKIILEQS
>rps6 [gene=rps6] [prot=30S ribosomal protein S6]
MKTITIPRQNLTQYEIMLIMRPDLPEEKFLKFLSEIKEHAKRNLALEFNLSNRGRRKLAY
AMRKFQDGIYIQFNFLGSGYILNSLIKRLKLEESILRYIVQKT
>ycf60 [gene=ycf60] homologous to orf203 in Porphyra purpurea
MRINLFVNILFGTACIIIFGLVILISYKLYRYIPKRNNSNKVYKEDYPSIMARAISCLIY
FLPLLEGIAQFGIVCIDDHSWIRIIYKNTLAYIVVPYLESPLIGFCIFITLYLIFVRGII
QISKFIKFHIVQALLLYLLDSVIGTVLTSLPLEIGYSFIGDRLADTLLLITFMISIYAGT
DALKGQYSNIPLISEAAKMQSKSTD
>thiG [gene=thiG] [prot=thiG protein]
MLIDSLRVLKIKVARKFYISYFIIIMNKDFCIKNKKFQSRLILGTGRYRSLLEAKQSIEA
SGCDIVTVAIRRINADNIGFIKSLIKLINWQKYWLLPNTAGCQTAEEAIRVANLGQEIAK
QLGQVDNNFVKLEVIPANKYLFPDPIGTLKAAEHLVKQGFVVLPYINSDPILAKQLEDIG
CSAVMPLASAIGSGQGLKNIDNIRIIVEASKVPVIVDAGIGVPSEATQVMEIGADAVLIN
TAVAQCKVPVAMANAMRLAVAAGYEAHSAGRIPIKNYARTSSPNFDRIGQI
>trpG [gene=trpG] [prot=anthranilate synthase component II]
MILIIDNYDSFSYNLVQSVGEINSDLIVLRSDEIDVSKLQNLNIKHIIISPGPGHPDEYT
ICKQVVKFFAPYTPILGICLGHQIIATCYNASIKKSSPVFHGRASKIYCLKDKLFLGIHA
PFTAARYHSLVVDQDKRGLDLTTCLKTIAITREGVIMACKHRYYHFTYGIQFHPESMLTI
QGTKLLKNFLSLSYG
>ycf44 [gene=ycf44] homologous to orf437 in Porphyra purpurea
MVSITLKTNRIFRSCLNLATNLKFSITLFIIICIVSAIGTIIPQDKPKEFYMNTYSLKVL
GMPLWKIIQLLSLEKIFYSNFYLILLLCLSFSLFFCSLKSQFPYLRTSRIIKLNNNNPPT
SPLHESKKIKYNNIASKNDSSCVQLVSQGYKIYTFDKNLDKAGPLLIHLSLILILLGSAI
HAFNDFIAQEMIPIYEVSHIQNVISSGRISKIPQTISLKASAFTVEHENEKVVKQFITNL
AMLNSKGEVLKQGLVSVNHPLVYKQVYIFQMDWKLFGIRVNYGKNKIYEFPVQKIEANNE
QQWSCTIPAKNQSKLILIFKNMSDEFYVYDNNQNFLKIGKINTPQLIRNTYFTVISKISG
TGLQIKKDSSINIVYTGFLLLIIGLVINHKGSKKRT
>rpl34 [gene=rpl34] [prot=50S ribosomal protein L34]
MIQRTLTGTNRKKTKRSGFRSRMLQTEEEKLLILDVMKKRYYLVK
>secA [gene=secA] [prot=Preprotein translocase subunit]
MTIYLCIAFNMVNTYIDYLRLRKYWKILNQIKKHREEIKQLTNNCLKIKTTEFKKRIKSG
ISLDQILPETFAVASEAAERVLGLNPYDVQMIGGIVLHEGKIAEMKTGEGKSLAASFPAY
LNALTEKGVHIITVNDYLARRDYESIGKIFEFLGMKVGLINQYTPISKRKNNYLADITYV
TNSEIGFDYLRDNMATQIKELTQRPFHFCIIDEVDSILIDESRTPLIISGRTKTRKDKYE
LAHRLANFLKKSIHYKIDEKNRTIILSDLGVITCEKILKIKSIYSAQNTWAHFIYNALKA
KELYLKNVHYIVRDQQAIIVDEFTGRIMPERRWADGLHQSIEAKENLQIKEETKTLASIT
YQNLFLLYLKISGMTGTAKTEENELISIYSLPVICIPTYKSMIRKDLPDLIFQTEIEKLK
AVTEECVKMHLLGRPILVGTTNIQKSEILSQLLNQYQIRHNLLNAKPQNVKRESEIIAQA
GRKYAVTISTNMAGRGTDIILGGNLEYIIKNKITSLFKPIILTGNTQYIIIDKSLKSSGN
EIRDINSNILKIINLHRQNPKLTIAEFGNSLNIASKKIKSNNEYILNLRSIYIIFENIYK
KYFDIESKEVKNIGGLCVIGTERHESRRIDNQLRGRSGRQGDVGSSIFFISLEDNLLRIF
GGERISKMMHTFMPSVNEPIQSPLLSRSLDSAQKKVESLHYNFRKQLFQYDQILNSQRKA
IYLERRLILESNEIVAWTMAYMELTIIDILNDQYLYSHRKPRDKVLKNINKIYDLLASPI
SLIKIEKYTFNKKTILKQLKISYDLKKAQIDKTSCGLMKSLERSLILEQIDTNWSEHIQQ
MSFLKEFIGWRGYAQKDPLIEYKNESYILFIKMIRTIRQNILYLLFRAEPTLDFS
>cpcA [gene=cpcA] [prot=phycocyanin alpha chain]
MKTPITEAIATADSQGRFLSNTELQSCAGRFQRAGASLDAARSLTANAQRLIDGAAQAVY
SKFPYTTQMTGPCYASSAIGKAKCSRDIGYYLRMVTYCLVAGGTGPMDEYLVAGLEEINR
TFDLSPSWYVEALKNIKASHGLSGAAASEANAYINYAINSLS
>cpcB [gene=cpcB] [prot=phycocyanin beta chain]
MLDAFSKVVAQADARGEFLSNTQLDALSKMVADGNKRLDATAAISANAATIVTNAARSLF
SEQPQLIQPGGNAYTNRRMAACLRDMEIILRYVSYATIAGDSSVLDDRCLNGLRETYQAL
GVPGASVALAVEKMKEAAIAFANDSSNVTIGDCSALISEIATYFDRAAKAVV
>gcaA [gene=gcaA] [prot=L-glutamine-D-fructose-6-phosphate amidotransferase]
MCGIIGYVGEGSCRDVLINGLDKLSYRGYDSAGIAFIKNSKINVVRSKGRIEKLKEKIND
NFQKFEIGNIGIGHTRWATHGEPTEINAHPHLDAEGQFAVVQNGVIENYVQLKNYLTVNG
TYFLSDTDAEVIPHLIAYKQKHLKLQIVEAILCALSELKGNFSTVIIARDMPDSIFVYQN
KTALTLGKGSNFYSVSSDPIALIPYTKNFIQLHDRELGIISISQLAIYNKGKFTYPSRRF
KANLNDLITNKASFDSYTLKEIHDQKKVLRNLIISTLQSEKSIDESGQLHLEYKKIKNFQ
IIACGSSFNAALVGKVILEKLIRIPVHVYYGSEFKTNLPPLLPCTLTIAVSQSGETGDML
SAIEIEKSRRKFQNTVYKPYLLSITNKNYSSITKKTAQSIDLKAGIEIGVAATKTFTAQT
LSFYLLALKLAEHKFTLRKKEINKHLDEIRNLPKAIAHLLIKDESSIKWLSKQLKEISKC
FYIGKGLNLGSALEGALKLKEISYIHCDGYAAGEIKHGPIALVENNTLIITITDPEQSQE
STFASSQEAKARGAVLLAITHIEDSSIYQTFDFIIKIPKISQICASITSSVSLQLFAYYM
AYYKGNDIDKPRNLAKSVTVE
>ycf61 [gene=ycf61] homologous to orf75 in Porphyra purpurea
MVDKRNHYFLLHKIEELLELSASKYKTTMEIANYAKKTKNRNANKSNIKPVILAILEISG
ELKLNDINKLTN
>gltB [gene=gltB] [prot=glutamate synthase (GOGAT)]
MISISKRTSIARINLSEFHTISKIDRYPWLNKEKDACGVGFIAHLDNKFGHKLMMNALEA
LATMEHRGACSADEESGDGAGILFSIPWKFFVEWSLRYKQFKINISQAAVAMLFLPCLSS
DIQVSKNIVEEIFQDEDFIVIGWREVPYVKEVLGPLALRNMPQIYQIVVQSKRYQGRSLD
FHLYRVRRKIEKEITVRAYSWAKDFYFCSCSNHTIVYKGMVKSTSLGQFYQDLYNPDFEI
SFAVFHRRFSTNTMPRWPLAQPMRILGHNGEINTLLGNLKWMEARESSLNHPTLNEVASI
GPVVNVSNSDSANLDSVVELFLHVGHSCPEALMFLIPEAYENNPKLKYHQNLISFYEYCA
GFQEAWDGPALIVFSDGHTVGASLDRNGLRPARYCVTEDNVLILASEGGVLNLDPSLIRL
KGRLGPGEMIVLDLQEKLLMSNLEIKNKIASLRPYSDWIKQNRQVLIPTSFLTSTTLPLQ
EVFKRQTCFGYTSEDIELVIENMAIQGKEPTFCMGDDTPLAVLSGKSHVLYDYFKQRFAQ
VTNPPIDSLRESLVMSISSYLGSKTNSFEESSEKILKIKTPILSENDLVLIKNSELLTET
LVTTFEAHFDSPQANGQSLFSTINQLCKQAKNLIQAGTKIIILSDKVCFESRTESYIPPL
LVVGSLHQYLIKQGVRQKVSLIVETGQCWSTHHFACLLGYGASAVCPYLALETVRHWWMS
ERTQNLMSKGKMPNLTLIEVQNNYCKSVERGLLKILSKMGISLLTSYIGAQIFEILGLGK
EVVDLAFEGTVSRIGGLSFADLAMETIDLCSAGFSKLNKKKLDNHGFVQYRPGGEYHLNN
PMSKALHKAVRENNYTLYEAYKQLLANRPPTNIRDLLEFNFRSCSVPLEKVENIFEITKR
FCTGGMSLGALSREAHETLSIAMNRIGGKSNSGEGGEDSLRFTVLTDVDETGNSPSFPHL
KGLKNGDSLSSAIKQIASGRFGVTPEYLVNAKQLEIKISQGAKPGEGGQLPGKKVSPYIA
TLRACKPGVTLISPPPHHDIYSIEDLAQLIFDLHQVNPECKVSVKLVSEIGVGTIAVGVA
KAGAEIIQISGHDGGTGASPLSSIKHAGVPWELGLHEVHCLLVENNLREKVILRVDGGLR
TGQDVVMAALLGADEYGFGTIAMIAGGCIMARVCHTNSCPVGVATQKEELRMRYPGVPEN
VVNYFIFLAEEIRVILSKLGFETLSQIIGRKDLINHNFDKKLCKTHCIDTSIFFNIKTNE
YNFLEIPGGHSKKLKTSLLDYELLNSSDILYAIDNHKTLEKHIKISNSDRSVGAKLAGRL
AKQYKNEGFRGSLILNFYGTAGQSFGSFNIKGVTLRLIGEANDYVGKSMSGGEIVIVPPS
EVAFDASEQVILGNTCLYGATGGFLFAYGAAGERFAVRNSNAFSVLEGVGDHACEYMTGG
RVVVLGKAGRNIAAGMTGGIAYFLDEYSNLPEKVNLDIVRIQRVVTNEARKQLIQLIEKH
VLKTGSKKAVLILQQWEIFIHYFWQIVPPSESETSETNYFVENKVLAN
>psaC [gene=psaC] [prot=Photosystem I iron-sulfur center (subunit VII)]
MVHVVKIYDTCIGCTQCVRACPCDVLEMVPWDGCKASQIASSPRTEDCIGCKRCETACPT
DFLSIRVYLGAETSRSMGLTY
>ycf23 [gene=ycf23] homologous to ycf23 in Porphyra purpurea
MVNKSQVLLDIANKKAIKVISGLTNLNYEHVLTIARASQRACVSYIDIAADPQLVKVVKA
NVNIPICVSGLEIQPIYNAVLAGADLIEVGNYESLYKRNTVLSVCKIITLVEEIKKLCPR
VPLTVTIPYILNQKDQINLCKQLESLRVDYIQTEGNSISKCKNHCVQDLLRLSLQTLACT
YELVKHTQLPIICSSGLSDVTVPLAFSLGASGIGIGKFVTSYYEEEKIVSILSKIKKIVS
GTRSYQACE
>accA [gene=accA] [prot=acetyl-CoA carboxylase carboxytransferase alpha subunit]
MKMLDKTLPLEELESSLTKTESKAYYLSKLVYRHDKVVNNKAHILQRKLLNLKKQLFYGL
TSYQKLCVARHKRRPTTLDYIEYLLDSWIELHGDRRGSDDPAIITGIGRIGRRSVVVLGQ
QKGRNTKENVLRNFGMSSPGGYRKALRVMEHANKFKLPILTFIDTPGALAGVSAEKSGQA
EAIATNLKKMFSFEVPIISTIIGEGGSGGALGICIGNYVMMFENSIYTVATPEACSSILW
KDSTKAADAAEALKVRAEDLLTLKIIDEIIPEPFGVAHDYPLLMVRILKNKIRDQLDFFD
TFSPSELKHHRYLKFRKLGLYYDC
>psaK [gene=psaK] [prot=Photosystem I reaction centre subunit X]
MLASYLNLFNTPWNSSISIIMILSNIMAIVVGRYSIKVRGLKPPIAISQLKDFGVPELLA
TMSLGHIIGVGSTIGLKTLNFITY
>ycf5 [gene=ycf5] homologous to ycf5 in Porphyra purpurea
MEQYILKLENSINILAFLGALVSSLFYWAKLTYYKQIQVFSLPKFCLIFSNCIIAGMLLE
RCFRYSYFPLSNLYESLLFLSWVLNIITIIFVDKLSIIGAIGSSAVTLIIGYANYILPPS
LRQTSILAPALRSNWLMMHVSVMIFSYGLLIMGAFLSLIYVIVNNNLSQKSLNRMFYLPS
FYVDFDKNEPRNDIGTATINRNKLSYETIESLSYKFISLGFISLTLGIISGSVWANEAWG
NYWSWDPKETWALITWLVFATYVHIRNKKWNKIYASLVASLGLIVICFVTWE
>nblA [gene=nblA] homologous to ycf18 in Porphyra purpurea
MQSLTLEQEFKLKVYKENLKKLTLKQSQKHLVEVLKQMMLKDNIIKYLIRNSYF
>cpcG [gene=cpcG] [prot=Phycobilisome rod-core linker polypeptide]
MAIPLLYYPYSSQNHRVNSFEIKGNDEQPRIFSTDSLPTSSEMDEIIWAAYRQIFSEHQI
LKFNRDTYLESQLRFNQITVREFIRGLLLSERFRILNYDVNNNYRFSEMCVQRVLGRDIY
NDKEKIAWSIVLCTRGIKAFVDSLVNSKEYEENFGDNTVPYQKRRVIFQRSKGEVPFNLK
TPRYGSDFKERLGMPQYAWQGAIRTFRPQEIKPRPGDPVLYLDMSRELLFSRFR
>lipB [gene=lipB] [prot=Lipoate biosynthesis protein B]
MMLIIRYGLLNFETSWVHQKTMVFIQIRKRQKKKLSIYLKHPQVYTLGHRANKEYISFCS
NNTLVNLHRVDRGGEVTYHDYGQVIIYNITHLQKINRNVNIYIANLEQLGKRILLLYKTK
STKKEKFPGIWIQQKKIVALGIKIIQRTTFHGLSINFSCSKRNYELILACGIKDGISVNF
NEIHKKNSQNQFYWKYKIVLLIVDILAFNNIISF
>ycf20 [gene=ycf20] homologous to ycf20 in Porphyra purpurea
TRVIKQINKTILATCSFIFLFGFFLSSATSTILIQTNEWSILTAAILISIVELFNYLKHK
FQFNDRKSGYNCFFFINLAKLGLLYGLFIDAFKLGS
>apcF [gene=apcF] [prot=allophycocyanin beta 18 chain]
MQLQDSIVNIISTYDNAGKYLDSNAITNIKKYFDTADTRLGIVKIINANSSLIIQQASSQ
LFERNPELIRPSGNAYTTRRYAACLRDIDYYLRYASYSIVANDTSVLSSRVLAGLKDTYN
SLGVPLASIVTLLELLKELIKEKTKNINDAHKYIDEPFLYMMKILCENDV
>psbA [gene=psbA] [prot=Photosystem II Q(b) protein (D1)]
MTVTLERRESTSLWERFCSWITSTENRLYIGWFGVLMIPCLLTATTVFIIAFIAAPPVDI
DGIREPVSGSLLYGNNIITGAVVPTSNAIGLHLYPIWEAASLDEWLYNGGPYQLVVLHFL
LGVAAYMGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
NFMLVFQAEHNILMHPFHMAGVAGVFGGALFSAMHGSLVTSSLIRETTENESPNYGYKLG
QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVVGIWLTSIGISTMAFNLNGL
NFNQSIVDSQGRVINTWADIINRANLGIEVMHERNAHNFPLDLADNSLLPVASSSPSINS
>rpl32 [gene=rpl32] [prot=50S ribosomal protein L32]
MAVPKKRTSKSKKKSRRSHWINKAKTRIRNFLNLAKSISNKKATSFAYSTIKN
>ycf32 [gene=ycf32] homologous to ycf32 in Porphyra purpurea
MDIRLIIVLMPILMAASWAIYNIGKALVGQFGKMLNE
>rbcR [gene=rbcR] homologous to ycf30 in Porphyra purpurea
MTDLPFTLDQLRILRAILIQGSFKKAATSLYISQPAVSSHVHNIEKQLNIQLFDRSHRNA
QLTEAGQLLLKYGGRILALCEETCRALEDLQNLQCGNLIIGASQTTGTYLMPKLIGLFRQ
KYPQISVQLQVHSTRRISWSVANGQLDLAIIGGEVPKELTEILEVRNFVEDELTLILPPS
HPFSKFSCIQKEDLYRLRFIALDKNSTIRKVIDKILNRNGIDSSRLKTEMELSSIEAIKN
AVQSGLGASFVSISAIDKELKLQLLNRVNIDKIKIKRMLSIITNYSRYRSKASETFCHEI
LGLLVNLPFKNAPSTEK
>desA [gene=desA] [prot=fatty-acid desaturase]
MTPIGLVRSFKTLTSRYLDNLTLVLFLIAMLLITISIFSYFILHLNSSICFLINLLSLHL
LGTVIHDSSHKAAHDNKYINYFIGHISAFFLGFSFPVFSRVHMQHHAYVNDANNDPDHFV
STAGPLWLIASRFFYHEVYFFQRKLWRNKELIEWIWARTLLICLLFIAFETNILEYVFKC
WFCPALVVGFALGLCFDYLPHYPFKYTDRWHNSCVYPSKFLNLAIFGQNYHLVHHLWPSA
PWYFYKEMYTRNRLFLQINQSPQSLAFSFSVKAMSKFLYDLFLGIKI
>ycf54 [gene=ycf54] homologous to orf108 in Porphyra purpurea
MKADYNTYYYIAASKHFLTQEEPLEEILREKTEHFIANNKSIDFWIFDSTKLNAHSPNEI
KTLQKTFFFPTILIISSNKKFITWLKLRLRYIFTDKIQLAIKL
>cobA [gene=cobA] [prot=urophorphyrin III methylase]
MTHNKTIKKVYIVGAGPGDPELLTLKAQRVLREADVVIYDALVNPEILQHCKPNAEIIKV
GKRRNNHSFSQLQIASLLIDRAKKGERVIRLKGGDPLIFGRLGEEILELFSKNIEIEIIP
GITSAFAVAADMKFPLTHRQLGSSITFLTGEEFYEKTTNKLKWERIIWGADTIIVYMILY
NLPKIIKKFLSVGYSAEKPIVLVQWASLKKKNFLIGTIGTIIHQVIESKFGPPSLAIIGE
VIEISSIIQKL
>ycf55 [gene=ycf55] homologous to orf320 in Porphyra purpurea
MRNNIKSDIWSFHNKFRFDKKIILLLIRVSIKFNTKLVNYSRRPLFLDLLSVLTKKILFS
LAVKSFKDTFITLKIRNCSSLFLKHNSLLVFNSIILKLLKNFYDVLGFSSYEEKKFLILF
QNESLYKLCAFEFRDLTEIVFTFIIFGEIHDKDYSGKVCSNELNFRCLENFLIRVCDCVV
YFSIKYNYNSSILYALRGHSWIKSFKDKQRLFIYLLLSSYFHSIIDTTQKLNNSIFRGWI
VRGTYIDSISFEQFSLTSLKKLPKISLLVFLLINVIDTVIPQFNLFILFLRKAITFIFSD
LIIKTNLL
>ycf53 [gene=ycf53] homologous to orf238 in Porphyra purpurea
MNRIRFISLILNLDSCDSNIQEYSRLAYVHDLNKLMDENFVSLLLIILKLAKNSKRLQPT
YHNVYLFNLLKSYALSEIDGYVLGHFSRGFVNTLMHYKNAQYETLESLLSANNFFEANKF
TQQILLELAGEQSKQRNWMYFTDVHSINHQSVSDLNHLWELYSQGNFGFSIQKRIWISVN
KNWKKFWKKIGWINSNSKWLKYPGEFMWAVNAPPGHLPLFNQLRGVYVLEFIFDYYL
>carA [gene=carA] [prot=carbamoyl phosphate synthase small subunit]
MEKFKLLKLGKPATLLLEDGTVFRGKSFSNPQTVTGEIVFNTGMTGYQEIFTDPSYNEQL
VVLTYPEIGNTGTNLDDYESLKIQAKGIILKNLSNAYSNFRAMRSLLSFLKRHKVVEIHD
IDTRALVLHIRNNKTMLAVISNETYNLTFKEAKATIKYGKHTLNSNLASRVSTSLDYYQW
MQPLNRKLKFGYSIIRSFNSAINKKLHTSKKLRIIVLDLGVKFNILRYLKSFECEVIIVN
YKSTYQQVMKFHPDGIVISNGPGDPAKINRVVVRVNKFINKKIPILGICLGHQILARCFE
AKTFKLKFGHRGLNHPVGINKRMEITSQNHGFAVNFEFLKSNKFYANHLNLNDGTLAGIS
SQNFPLISVQYHPEGSPGPHDSNYLFKYWVYIIYKSKSS
>rpl27 [gene=rpl27] [prot=50S ribosomal protein L27]
MAHKKGSGSSKNGRDSNAKYLGIKKFGKQIVTPGQIIVRQRGTKIKPGLNVGLGRDYTIF
SMIAGRVNYSTQKNKKIVSVDPSYGKIQAIEIRKASHFAT
>rpl21 [gene=rpl21] [prot=50S ribosomal protein L21]
MTNYAIVKASGRQLWFEPGKYYNINYVHANPGDKIIFYKVLLLKNTNSLLIGKPFVEKVE
VHATILQHLKDKKITVFKMQAKKGTKKKKGYKTVLTKIKINCIHNHKK
>ycf39 [gene=ycf39] homologous to ycf39 in Porphyra purpurea
MSLLVIGATSTLGRQIVKKALIQGYEVKCLVRNSKKAAFLKAWGAILVYGDLMVPETLPQ
CFVGASVIIDVSTVKVKDLNNDYTVDIYCKRAVLEAAIQAKVKKFVSFSMFNSSQYLDVP
STKIKSDFDRALIKSGINYLIFTPLGFFQDLTSQYAAPILSSQPVFILEQSESVQISYID
ARDAANIVLAATSLAFLKNIDFPLIGNRSWNNVSIISLCQLYAGQASPVVTVPLLLVYFI
RRILGFFAFTRQFYFYLTLVENLSRSSYLSFNHENENKFLKIYQKKLFSLEKYFQYYFTH
KLGNLKKQINNF
>psbI [gene=psbI] [prot=Photosystem II protein I]
MFTLKIFVYSCVAFFCSLFIFGFLSNDPSRNPNRKDLE
>ycf58 [gene=ycf58] homologous to orf149 in Porphyra purpurea
MRLRNILEQYEGMWYIMCNQCYTRYNKINRKNGEIKIRLKKSKSTINSFSILTTNYPKLN
RGAGKDFTLFLSNLNSNLTMVLKQASKSKLISMGSCEWRDKNIVHIRMYYRDLVLQETIF
LTNNNLSFSILITKSKKKVLNVTFSSWIRLKSKTTLNPCD
>ccrf1 [gene=ccrf1] weak homology to RAP1 in Plasmodium falciparum
MIIMNIQHHLNSCIAYIEHRCSKGNHHAENRIRLSPEIFNAYCSKKIVIKSSINKCTIKK
VYKNSTINQLENITYNIDKKKLKLLLRKIGDLGYFTKVSISNYYYPRQEVIKIHLSPNKI
LKTIKTKKKFFIPCQDIKSIFEKQFDHPKNIKHLLHSYQNLAEWHLKRNINFVQIYIEEN
LKKDTQTKNFSIKTLGNKNIKWIYNTSIDTCPKNNTDKKKSASIINPPLTLKKIRNRLKQ
EPSLEHEYKIIQVESSEQILLLVDISNLDRNIYSFVWINKLNTQLWDNYIKEIKTINCKN
KNWNSLNSTREDKKSPKQKNRNVFFKKLFHCFESSKIYKTPKLYDFKQFNQVKLKYDNLK
GRKHKIDFVVKTTNNGLFINLKEISPWEPKISHGDYYLQKEFYRRINYLVSNYELFASNS
LHKHYSYSSFIEKGTSYHLSRRLYPNLIISTDFKLIETFAESIFLIKNPYINFHKRLSKS
AKIEKNREEKLCTTTLEVNKKHKMILLETGISKQDDKVKINNILNPNSKLSLKITNILLA
SNAFLRTFFIQIQAQYVKVIKLRQFNYYYFDKIETGEATVKINYVPKDINFIENILTNPQ
AIRSKTILNRRISTPSYQCKSSIEYYLQLNENLNSIFFLLNYTTKLNQFRHLKPTYPIKD
SLLRKVDYLNEISMGIGAQTFDEEDKASVLRLEYCLSNSKGFFLTFKLLSIT
>ycf10 [gene=ycf10] homologous to ycf10 in Porphyra purpurea
MKNWKFNKINYPTFEKSGAIPRSITKTFEKLKKELNPHSESEIIEEFTISRYQTIASLRY
LIVLVVFPVVVHQVSKNFIIGPAVDYFWKYNQIDVFLNSSQEERAFAELQRFEEKIHFEM
LIGTKQSVSQQSLEASIKQKAVEIADHYTYESLHAIKNILADSISISVFILLIVLGKRQT
FVLKSFLNEIVYGLSDTAKAFLIILFTDMFIGFHSPHGWEVVIESLLRHFGLPENRDFIF
LFIATFPVSLDTVFKYWIFRYLNQVSPSAVATYHNMNE
>psaL [gene=psaL] [prot=Photosystem I reaction centre subunit XI]
MINYIKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIG
PFYKLGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENNDKLQTANGWRQLA
SGFLLGAVGGAGFAYILLANNLLSTSTPILQT
>ycf49 [gene=ycf49] homologous to sll0608 in Synechocystis sp.
MYSLSLPTWNIHIVTLVEWSIVIRLIYLFTYFYDIPRSFNFLIIILMIFFFLSGLFACCW
HFFNNNSILLWISVAQAALTAFSNFFFLLFISAYYHK
>ycf4 [gene=ycf4] homologous to ycf4 in Porphyra purpurea
MKKIKRDKIVGAGKISNYLLLIIMLGGGISFFIVGFLSYFKAFEHIALFSRFVNSDIRFI
PQGITMIFYGTMAICLSIYIYFSIYYDIGAGYNEFNLISKKVVVFRKGFPGKNRLIKFVL
PIPHLKSVKVMARGGINPKYEVFLYTKNLSRIPIGQVFKLSKLEYQASEIATFLGLAFEQ
YNL
>psbE [gene=psbE] [prot= Cytochrome b559 alpha chain]
MSGGSTGERPFSDIITSVRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGTPRPNEYFSEN
RQQVPLINDRFNAREELDDLTSNL
>psbF [gene=psbF] [prot=Cytochrome b559 beta chain]
MANKPLQPISYPIFTFRWLAIHGLAIPTVFFFGAITAMQFIQR
>psbL [gene=psbL] [prot=Photosystem II protein L]
MSGINPNKQPVELNRTSLFWGLLLIFVLAVLFSSYFFN
>psbJ [gene=psbJ] [prot=Photosystem II protein J]
MNSTGRIPLWLVVTFGGIVVLTVLGIFIYGSYSGLGSSL
>psaI [gene=psaI] [prot=Photosystem I reaction centre subunit VIII]
MAISYLPAILVPVIGLVMPIFCIVFLFLYIEKESLN
>ftrB [gene=ftrB] [prot=ferredoxin-thioredoxin reductase beta subunit]
MRKTPKNLESLHKFAEAYAKLSRTYFCIDQSITALVIEGLARHKDDYGAPLCPCRHYENK
KTEVLAAYWNCPCVPMRERKECHCMLFLQPSNEFSGESQLISKDDLQKHLS
>atpA [gene=atpA] [prot=ATP synthase CF1 alpha chain]
MSNIRPDEISSILKQQIERYNESVKIENTGTVLQVGDGIARIYGLDNIMAGELLEFEEKT
IGIALNLETDNVGAVLMGDGRDILEGSSVKGTGKIAQIGVGDNLLGRVLNALGNPIDGKP
NPNSTDYRLIEFNAPGIVSRRSVCEPIQTGITAIDAMIPIGRGQRELIIGDRQTGKTSIA
LDTIINQKEENVICIYVAIGQKASSVAQAVTLLEEKDALKYTVVIAANANEPATLQYIAP
YTGAAIAEHFMYKGLATLIIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLE
RAAKLNNELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPSINV
GISVSRVGSAAQIKAMKQVAGKLKLELAQFDELQAFSQFASDLDKSTQAQLARGQRLREL
LKQPQASPISVYEQIPMIYAGINGFLDDIKIDRISLFIKKLQECLSNSYPHFYEAIKESK
QLSKENEEVLKKAITEVKKNLSFI
>atpD [gene=atpD] [prot=ATP synthase CF1 delta chain]
MILLLTNSKIIYPYSEALFSIAKDQEKFEVIKNDMELFVTFTKNLNGFKKFLETPLINKN
KKIKVVKDVFSKILNSTTLNFISILINKNRIMFVSNISEKYNQLVLKDKSVKLVKIACAR
QLSEKQAQALSEVLKHKFKCLSVKLIFNIEPELIAGFKIFIESQVIDVSLQGELKEFEWY
LTK
>atpF [gene=atpF] [prot=ATP synthase CF0 B chain (subunit I)]
MRSQSLNFVASNTTSDFISNLLESNVINIIILISLLIYLGKRTIVTNLNDRKLNIQCSIL
EAEKKLSQAQLRLAEAEKKITESEEIISILKHEAKIAANKIKELIVNNAKRKIDKIILDG
KTIIANTEIEIMNQIKNRIISTAIDKTKIKLTKNLQAETIERITDNKITFLNNNL
>atpG [gene=atpG] [prot=ATP synthase CF0 B' chain (subunit II)]
MQDILNIYLSSEESGGLFDFDATLPLMASQFLLIMLILDITFYKPINKVLKDRENYILKT
LESATQISEKTKETLARYEEVILKSKKESQQLIDSIKTKTEHDIVNELIQTQNSTREFIS
KSIKELYRKKEQTLKVLEEDTENLSDKIYLKLINPKQ
>atpH [gene=atpH] [prot=ATP synthase CF0 C chain (lipid-binding) (subunit III)]
MDPIISAASVIAAGLAVGLAAIGPGIGQGSAAANAVEGLARQPEAEGKIRGTLLLSLAFM
ESLTIYGLVVALSLLFANPFIK
>atpI [gene=atpI] [prot=ATP synthase CF0 A chain (subunit IV)]
MISNNLEICSIDIGVHWYWNFLGLKIHGQVLLVSWVAIIILLLLAILGTFNMQKEPRGFQ
NFLEYVFEFLQDISKNQIEEKYYKSWVPFISTLFLFIFVSNWLGALVPWKLIKIPEGELA
APTNDINTTVALAMLTSVSYFYAGLSKKGLRYFLKYISPTPILLPINILEDFTKPLSLSF
RLFGNIVADELVVAVFNLLFPLFLPLPVMVLGLFASSIQALIFATLSASYIGESLADHH
>tsf [gene=tsf] [prot=elongation factor Ts]
MSNKSSKTSKVSIDLIKQLREKTGVSIKDCKEALRKHDGDIAKALREIQEQGSAIAQEKH
NRITVHGRIASYIHINNRMGSLVEINCETDSAANSEEFAKLCQHIAMQIVACPEIKYVKF
EDIPEEIKNHYIEVESQSKDLQDKPAQSKNKIIRGRIDKKLRRMCLLDQANIKDDKVTVN
DLIKEKINKFKENIQINRFARFTIGEKI
>rps2 [gene=rps2] [prot=30S ribosomal protein S2]
METSLSELLDASAHIGHSTSKWNPKFFPFIHMTKKGIHIIDLIKTIQQISVACMFLKKEV
RNGKRVLFVGTKNQASKVVEREAKKCQEFYINQRWPGGLLTNWPTIKLSLKKLQLLEEKE
KLDHLGSTSKKEEASMKREIQKLNKYLNGIKGMKKPPDIIILVDPSREKTTISECQKLNI
PTIGILDTNCNPKSVNVPIPANDDSIKAIDLIVSKLSTSIFKAKLENNQFIENSTENLNE
HVK
>rpoC2 [gene=rpoC2] [prot=DNA-directed RNA polymerase beta]
MVIDKKKVKNRTPYFLNRIIEKSELREIIEVVFHKNGIAKASLIADNLKEIGFGFATKAG
ISISIEDLKIPPNKSRILQITNQELRKTEISFKRAEITTIEKSQKSTDTWNNASEALKDE
IIKYYRLTDPLNPVYMMAFSGARGNLSQVKQLVGMRGLMADPNGQIIELPILSNFREGLN
VTEYLISSYGARKGLVDTSLRTADSGYLTRRLVDVAQDIIVREIDCKTNNGITFSNIQNN
EKIIIPLYKRLIGRILADDVKNPITPQVNIASKNTLITGNLIKEFKKNNIQKIKLRSPLT
CQSYRSICQKCYGASLSDGKLVDIGEAIGIIAAQSIGEPGTQLTMRTFHTGGVFTAEFSK
PIKTLFEGVIKYPSNLKFHHVRTRHGDDAIIIEKSATFDIRTTQSERKITLETGTTLLVK
DNSFIKKNQVIAETSTSGRLITEKSTKDLISNSAGEIYFSDITIEERVDRHGNLTKISKQ
HGLIWILSGEVYNFPMGANLVVQNSFEVNKGCLLAKALIKSRHSGISRIRCAANYYAIDI
ILGTVTIRNANLYKDSKLFNNNYLLKTSNKKNFVVKALVGQKLSHSDIIAELIDDQYLTN
TGGIVKYVNLKLAKTHKDDSEYTLSGIGYIFFIPQETHQINKDASILLANSGDYVNKNTE
IAKGVFCKCSGLLEIIKSNNIIKEIIIKPGVVYPVSNNLSTFTNKIFYPGEKIIDNIVTN
KIVYVEHIKLINKSCILIRPVNQYKVSNTESLFDFVTKGENKDLISLKVVNKSFFKDGEV
IKSVKGVSLVNIQLIFYTKPSATAVTTKMEFVKDLDKSTNSTSEIKLRITATETTKIKYK
QQKNIISQILIKEGQYITKDFPIIETLFLSRHDGRVVIKSNFKQKNNACLIIISPSNKKE
IYINKKEHKLKIGDFIRVGDHLGTNKNFKSPYSGEVLDINDKLITIRIAEPYLISPGTLI
HVNHGELIRKGDYLALLVFDKIKTGDIIQGLPRIEEILEARKPRETCHLAKFDGKIYVHY
NDKGESLISLESQKKEKYVYILRLNQRVLVQSGTEVTIGEPITDGLINPHEMLEIFFEYF
LTQTSPIQATKASFEKIRLELLKEIQQVYQSQKIEINDKHIEVIIRQMTSKVLIQERGDT
TLFPGELVTINQIEKINSAIIAVNKKEAKYKPVLLGITKASLNTDSFISAASFQETTRIL
TEAAIEGKVDWLKGLKENVIIGRLIPGGTGLISLDNKDSIKMRLALRHKKNFLNKTFKKK
NNKFLNKTY
>rpoC1 [gene=rpoC1] [prot=DNA-directed RNA polymerase beta' chain]
MVSHQFLPYLDYIKICLASPERIRVWAQRILPNGQIVGEVTKPETINYRTLKPEMDGLFC
ERIFGPIKNWECHCGKYKRIKDKGIICERCGVEVTESKVRRHRMGYIELSAPVVHIWYLK
GMPSYISVFLDMAAKEIEQVVYFNTYIITHSTAENKQIKYKQLLTEDEWVLIEDQIYRNE
IQGEIEIGIGASAILKMLKDLDLSLESDLLRTKLVNLKAVKKDKIMKRLRIIDNFMVTGA
SPSWMVLNVIPVISPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLEEILAPEIII
RNEKRMLQEAVDALIDNGRRGRVVVGANNRALKSLSNIIEGKQGRFRQNLLGKRVDYSGR
SVIVVGPDLKLNECGIPKEMAIELFQPFLIHQIIKEGLANNMKSAKKLMQKHTSVTIELL
QKIIKWHPVLLNRAPTLHRLGIQAFDPVLVDGRAIRLHPLVCPAFNADFDGDQMAVHIPL
SIEAQTEARLLMLAPNNFLSPATGQPIITPSQDMVLGCYYLTNNNLANQKGSGHYFSSFE
DAIIAYKQKLISLHAFIWVKFYGTINNLDIGRFIKSTLCKNKLTTTDYYENLQVKKDIEG
TITCQFIKTSVGRIFFNIAISGNLFFSTSNHNK
>rpoB [gene=rpoB] [prot=DNA-directed RNA polymerase beta chain]
MKKNQFANKLIVIDLLSVQRESFYSFLTEGLAKELNNFSPIIDYTGKLELHLVTNQLVIK
KPKFSFEEAKRRDCSYTISINIVTQLFNKNSGDVKEQEILLGEIPLMTQKGTFVINGAER
VIVNQIVRSPGIYFNSEMDKNNLKTFNFLIIPNRGAWLKCEIDKNDLIWIRIDKNKKINL
SIFFKALGIDHDDLRIKNAFRQPEFIYKNLNKDENYTQQEALEELHKKLFPGEPATSEAS
TKILYFKFFNPKKYDLGIVGRKKINKKLDLNSPENIRILTIQDILSGINYLINLKFGFGN
IDDIDHLANRRLKSVGELLQSQISIGLIRLERLIKERMTICEQSSLVPSALINPKPIFAA
IKEFFNSSQLSQFMDQVNPLAELTHKRRVSSLGPGGLSKERAGFAVRDIHPSHYGRICPI
ETPEGPNAGLIGSLAIYARINPDGFIEAPFYKVNQGQVLKNKGIIYLDAEQEDEFKIAPG
DIRINETNFIKEINVPVRYRQEFTQCPAEEIDFIAVSPIQVISAATSLIPFLEHNDANRA
LMGSNMQRQAVPLIFPERPLVGTGLEAQIAKDSGIMAISRSNGIVKFTSAEKIIVTDSSN
NQITYNLQKYQKSNQETCINHRPIVWPGERIKKGQILADGSATDTGELALGRDVLVAYMP
WEGYNYEDAFLISDRLVYEDLYTSIHIEKYEIEARQTKLGPEEITRNIPNVGENSLKQLD
ENGIVVVSSFVESGSILVGKVTPKGESDQPPESKLLQAIFGEKNKDVKDTSLRLPNGTRG
RVVDVRIFSREKGDELAVGINYIVRIYVAQKRKIQIGDKMAGRHGNKGIISKILPRQDMP
YLPNGTPVDIILNPLGVPSRMNVGQIFECILGISAFNLKKRFRILPFDEMYESDSSRILI
NQKLKEAQTLTNLDYLFNENHLGKVALFDGRSGEKFDNPVLVGKIYMMKLVHLVDDKIHS
RSTGPYSLVTQQPLGGKAQQGGQRLGEMEVWAFEAFGAAYALQELLTIKSDDIQGRNEAL
TAIVRGKTIPKPGTPESLKVLMREIQSLGLDIAAYRLPNLHHGEIKSIEIDLTHNKIVQK
R
>ccrf11 [gene=ccrf11]
MIFQFQIIYFKIDSIANKLDRSSLMNYFKEDLSGIIIKFGYLVIL
>rps20 [gene=rps20] [prot=30S ribosomal protein S20]
VANSKSAKKNIKITERNKVLNQINVSCIKALTKKYLRQINNDSFESNLLNTLYSKIDKAA
KMNVFHKNKANRLKSKLIKKLSGTNAYKITR
>glnB [gene=glnB] [prot=nitrogen regulatory protein PII]
MFSKLEAIIRPFKLEEVKVRLMTFGVPGITVTNVMGCGKQIGGIERSKGVEYDSELIEKV
KIEIVVMNEHIDELIEIIINAVWTGEIGDGKIFVSPVSSVIRIRTQDKDLDAI
>rpl33 [gene=rpl33] [prot=50S ribosomal protein L33]
MVKHKAARICINLECIDCKSNLHKRSNGISRYTTIKNRKNNPSRMELKKFCPYCNMRTIH
KEIK
>rps18 [gene=rps18] [prot=30S ribosomal protein S18]
MNKKIKIPKDSKAINYKTTDLIREFISDRGKIIPQRITKSTRKKHKLIEKAIKQARLIGL
MPFKQKNW
>atpE [gene=atpE] [prot=ATP synthase CF1 epsilon chain]
MALTVKVITPDRVVWKKTVEEIILPSSTGQLGILMNHAPLLTALDIGVMRARMVNTWVPL
VLLGGFAQIDNNLVTIIVSDAEEVKAIDEEEANKLLAASLANMEKAQSNREKIESMQNLR
RARARMQAILSLK
>atpB [gene=atpB] [prot=ATP synthase CF1 beta chain]
MKPCQLKQKQKTLAIAKVNNKGKVIQIIGPVLDIVFPDGQLPKVFNAIKINNSNNNWITC
EVQQLLGDNKVRAVAMSTTEGLKRGASAIDTGEPISIPVGKETLGRIFNVLGEPIDEKGP
VISNDKLPIHRPAPKFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIM
ELINNVAKAHGGVSVFGGVGERTREGNDLYQEMKESGVINEKDLNLSKVALCYGQMNEPP
GARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLG
TEMGALQERITSTLDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYP
AVDPLDSTSTMLQPGIVSDEHYTTARKVKETLQRYKELQDIIAILGLDELSEEDRLIVSR
ARKIEKFLSQPFFVAEVFTGISGKYVSLSDSIKGFNMILSGEVDNIPEQAFYLVGRIEEA
IDKAKQVEKS
>ycf3 [gene=ycf3] homologous to ycf3 in Porphyra purpurea
MPRSQKNDNFIDKTFSIIADLIVKILPTNKESKEAFYYYKDGMAAQSEGEYAEALACYYQ
ALKIEKDPMDKSFILYNIGLIQASNGQHARALEYYHESLKFNPNLVQALNNIAVIYHYYG
NKLFEQSKLQEAKLMFDKASNYWRKAIKLAPYNYIEAQNWLKITGRITEDIML
>ccrf10 [gene=ccrf10]
MTKLKSLLNDKKLTLISCLNKTIYDIN
>ccrf9 [gene=ccrf9]
MNNCLPKNKVFKILNFFKCIDPMCTDNLFKFPLYKLNKNKGKFTNKFYKNTKNKKYIDIW
LIFYIYYHIYLRIGKNQTKDLQITKC
>ycf19 [gene=ycf19] homologous to ycf19 in Porphyra purpurea
MKDGTDLILETTIAFLQIYIVLILLRMSLGWFPNINWYSQPFYSLSQLSDPYLNLFHGVF
PSFLGIDFSPIIGITLIDFIIELLSRQLKPL
>psbC [gene=psbC] [prot=Photosystem II 44 Kd apoprotein]
MLFNKDKNNIGGRSIESTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWTGAMTLFETS
HFIPEKPLYEQGMILLPHLATLGWGVAPGGEIVNTYPYFATGVIHLVSSAVLGFGGIYHS
IVGPDVLEDSFSFFGYDWRDKNKMTTILGIHLILLGIGAFLLVIKALFIGGIYDTWAPGG
GDIRFITNPTLNPAIIFSYLLKSPFGGEGWIVGVNNMEDVIGGHIWIGVTCVIGGIWHIL
TRPFSWARRAFVWSGEAYLSYSLGALALMGQTAAEYAWYNNTVYPSEFYGPTAAEASQAQ
AFTFLVRDQRLGANIASTQGPTGLGKYLMRSPTGEVILGGETMRFWDLRAPWLEPLRSSN
GLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNYVSPRSWLTTSHFFL
GFFIFIGHLWHAGRARAAAAGFEKGINRENEPVLSMRPLD
>psbD [gene=psbD] [prot=Photosystem II D2 protein]
MTIAIGREQERGWFDLLDDWLKRDRFVFIGWSGILLFPCAYLALGAWFTGTTFVSSWYTH
GLASSYLEGCNFLTAAVSSPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWTFTALHGSFG
LIGFCLRQFEIARLVGLRPYNAIAFSGPIAVFVSVFLLYPLGQASWFFAPSFGVAAIFRF
LLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGEASDTFRAFTPTQSE
ETYSMVTANRFWSQIFGVAFANKRWLHFFLLFVPVTGLWVSSIGIVGLALNLRAYDFVSQ
EIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL