Alphabethical list of proteins of the Cyanidium caldarium plastome

 
 
Gene  Position  Cross-Reference 
Funktion
accA
C 44108-45082 
P51371 Fatty acid, phospholipid and sterol metabolism 
accB
C 66644-67102 
Q06881
accD
122225-123028 
Q57417
acpP
68504-68764 
P29189
apcA
C 145824-146309 
P00314 Photosynthesis and respiration: Phycobilisome 
apcB
C 145264-145749 
P00318
apcD
121234-121725 
P 51195
apcE
C 146483-149095 
P51263
apcF
40075-40587 
P48087
10 
argB
C 142282-143196 
P31595 Amino acid biosynthesis/Glutamate family/Nitrogen assimilation 
11 
atpA
21584-23098 
P51242 Photosynthesis and respiration:ATP synthase 
12 
atpB
5004-6476 
P51259
13 
atpD
20987-21538 
Q40610
14 
atpE
6486-6887 
P51260
15 
atpF
20463-20990 
P51244
16 
atpG
19960-20433 
P51245
17 
atpH
19588-19836 
P51246
18 
atpI
18803-19522 
Q02847
19 
carA
32162-33361 
P51201 Energy metabolism: Amino acids and amines 
20 
cfxX
105097-106002 
P51228 Photosynthesis and respiration:CO2 fixation 
21 
chlI
C 109777-110838 
P49469 Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme,  phycobilin and porphyrin 
22 
chlN
C 90499-91686 
P51335
23 
clpC
86165-88729 
P51332 Translation: Degradation of proteins, peptides, and glycopeptides 
24 
cobA
35100-35855 
P29928 Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin 
25 
cpcA
53921-54409 
P00306 Photosynthesis and respiration: Phycobilisome 
26 
cpcB
53316-53834 
P00311
27 
cpcG
C 41650-42354 
Q02074
28 
desA
C 36169-37032 
Q44261 Fatty acid, phospholipid and sterol metabolism 
29 
dnaB
C 88931-90400 
P49519 DNA replication, restriction, modification, recombination, and repair 
30 
dnaK
140289-142145 
P29215 Cellular processes: Chaperones 
32 
ftrB
C 23142-23477 
P51386 Photosynthesis and respiration: Soluble electron carriers 
33 
ftsH
C 69109-70953 
P51327 Cellular processes: Cell division 
34 
gcaA
51327-53192 
P72720 Central intermediary metabolism: Amino sugars
35 
glnB
C 7419-7760 
Q55247 Amino acid biosynthesis: Glutamate family/Nitrogen assimilation 
36 
gltB
C 46324-50973 
P51375
36 
groEL
97581-99173 
P28256 Cellular processes: Chaperones 
38 
hisH
C 158269-158913 
P48262 Amino acid biosynthesis: Aromatic amino acid family 
39 
ilvB
73815-75572 
P31594 Amino acid biosynthesis: Branched chain family 
40 
ilvH
C 106314-106832 
P51230
41 
infC
C 108799-109356 
P51231 Translation: Protein modification and translation factors 
42 
lipB
40968-41612 
Q10404 Biosynthesis of cofactors, prosthetic groups, and carriers: Lipoate 
43 
lpxA
C 112578-113387 
P72215 Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens 
44 
lpxC
C 113400-114248 
P45070
45 
menA
C 79847-80767 
P44739 Biosynthesis of cofactors, prosthetic groups, and carriers: Menaquinone and ubiquinone 
46 
menB
C 80789-81595 
P27290
47 
menC
C 78721-79815 
P44961
48 
menD
83044-84822 
P23970
49 
menE
C 77216-78730 
P44565
49 
menF
81686-83035 
P38051
50 
ntcA
C 94894-95538 
Q05061 Regulatory functions 
51 
ntrA  
C 108065-108799 
P25885 Transport and binding proteins 
52 
odpA
C 152129-153145 
P51267 Energy metabolism: Pyruvate dehydrogenase 
53 
odpB
C 151124-152107 
P51266
54 
ompR
95562-96191 
P51343 Regulatory functions 
55 
ompR'  
C 163958-164707 
P51358
56 
petA
150146-151108 
P51265 Photosynthesis and respiration: Cytochrome b6/f complex 
57 
petB
C 94200-94847 
P48121
58 
petD
C 93687-94172 
P51340
59 
petF
124776-125075 
P15789
60 
petG
158111-158218 
P12120
61 
petJ
123657-124001 
P00110
62 
preA
153181-154152 
P51268 Biosynthesis of cofactors, prosthetic groups, and carriers: Menaquinone and ubiquinone 
63 
psaA
C 161545-163803 
P51284 Photosynthesis and respiration: Photosystem I 
64 
psaB
C 159308-161512 
P51285
65 
psaC
C 45963-46208 
 P51374
66 
psaD
156831-157253 
P51279
67 
psaE
71164-71373 
P49482
68 
psaF
120355-120918 
P51193
69 
psaI
23525-23635 
P51387
70 
psaJ
120968-121096 
P25901
71 
psaK
43752-44006 
P51370
72 
psaL
25894-26352 
P51222
72 
psaM
C 112367-112459 
P72986
73 
psbA
38775-39857 
Q32389 Photosynthesis and respiration: Photosystem II 
74 
psbB
C 72055-73584 
P51322
75 
psbC
2031-3413 
P51356
76 
psbD
986-2041 
P51357
77 
psbE
C 24208-24462 
P51391
78 
psbF
C 24050-24181 
P51390
79 
psbH
C 71455-71658 
P51325
80 
psbI
C 29986-30102 
P51236
81 
psbJ
C 23719-23838 
P51388
82 
psbK
157894-158019 
P14089
83 
psbL
C 23921-24037 
P51389
84 
psbN
71753-71884 
P51324
85 
psbT
C 71908-72006 
P51323
86 
psbV
123114-123608 
P51199
87 
psbW
C 96790-97137 
P51347
88 
rbcL
103032-104498 
P37393 Photosynthesis and respiration: CO2 fixation 
89 
rbcS
104721-104990 
P37394
90 
rpl1
92492-93214 
P48125 Translation: Ribosomal proteins: synthesis and modification 
91 
rpl2
C 137605-138432 
P49545
92 
rpl3
C 139459-140106 
P51314
93 
rpl4
C 138796-139455 
P51313
94 
rpl5
C 134016-134564 
P51302
95 
rpl6
C 133009-133554 
P14808
96 
rpl11
92056-92481 
P49549
97 
rpl12
93201-93593 
P23349
98 
rpl13
C 128415-128846 
P73294
99 
rpl14
C 134926-135291 
P49552
100 
rpl16
C 135770-136192 
P51307
101 
rpl18
C 132685-132975 
P73305
102 
rpl19
C 85352-85702 
P49555
103 
rpl20
C 154162-154509 
P49556
104 
rpl21
31505-31831 
P51209
105 
rpl22
C 136936-137247 
P06388
106 
rpl23
C 138479-138784 
P51312
107 
rpl24
C 134645-134929 
P73309
108 
rpl27
31912-32214 
P51210
109 
rpl28
C 102218-102376 
P51224
110 
rpl29
C 135586-135789 
P51306
111 
rpl31
C 127750-127977 
P73292
112 
rpl32
38417-38578 
P51207
113 
rpl33
C 7157-7351 
P49565
114 
rpl34
57400-57537 
Q55004
115 
rpl35
C 154575-154769 
P51270
116 
rpl36
C 130678-130791 
P12144
117 
rpoA
C 128853-129785 
P51293 Transcription: RNA synthesis, modification, and DNA transcription 
118 
rpoB
8259-11504 
P51252
119 
rpoC1
11597-13498 
P51251
120 
rpoC2
13512-17321 
P73334
121 
rps2
17405-18136 
P51249 Translation: Ribosomal proteins: synthesis and modification 
122 
rps3
C 136238-136861 
P51308
123 
rps4
100381-100989 
P48133
124 
rps5
C 132120-132626 
P73304
125 
rps6
61282-61593 
P73636
126 
rps7
C 126823-127293 
P51288
127 
rps8
C 133576-133977 
P51301
128 
rps9
C 128012-128398 
P51291
129 
rps10
C 125147-125476 
P51286
130 
rps11
C 129875-130264 
P51294
131 
rps12
C 127315-127689 
P19461
132 
rps13
C 130268-130636 
P48137
133 
rps14
C 158947-159249 
P51319
134 
rps16
C 99556-99783 
P51352
135 
rps17
C 135339-135572 
P73311
136 
rps18
C 6917-7123 
P51256
137 
rps19
C 137287-137565 
P73316
138 
rps20
7847-8122 
P48140
139 
secA
54678-57365 
P51381 Cellular processes: Protein and peptide secretion 
140 
secY
C 130840-132072 
P46249
141 
thdF
C 110895-112292 
P73839 Cellular processes: Detoxification 
142 
thiG
C 59669-60544 
P51361 Biosynthesis of cofactors, prosthetic groups, and carriers: Thiamin 
143 
trpA
118003-118803 
P51382 Amino acid biosynthesis: Aromatic amino acid family 
144 
trpG
C 59064-59651 
P51362
145 
trxA
C 102459-102782 
P37395 Biosynthesis of cofactors, prosthetic groups, and carriers: Thioredoxin, glutaredoxin, and glutathione 
146 
tsf
18126-18752 
P74070 Translation: Protein modification and translation factors 
147 
tufA
C 125484-126716 
P51287
148 
ccrf1
27348-29486 
P09975 unknown
149 
ycf58
29526-30008 
P51235
150 
ycf39
C 30295-31233 
P48279
151 
ycf53
C 33378-34091 
P51202
152 
ycf55
C 34113-35039 
P51203
153 
ycf54
35861-36172 
P51204
154 
rbcR
C 37126-38079 
P51205
155 
ycf32
38214-38327 
P51206
156 
ycf20
40668-40958 
P48409
157 
nblA
42478-42642 
P51366
158 
ycf5
42694-43575 
P31564
159 
ycf23
C 45189-45938 
P31605
160 
ycf61
51101-51319 
P51376
161 
ycf44
57813-59003 
P51363
162 
ycf60
60584-61201 
P51360
163 
ycf86
C 67117-67314 
P51282
164 
ycf45
67406-68413 
P51281
165 
ccrf2
C 70999-71094 
P15579
166 
ycf82
C 75598-76752 
P27127
167 
ycf83
76804-77214 
P49673
168 
ycf17
85058-85189 
P48367
170 
ccrf3
C 88721-88831 
P38188
171 
ycf40
96369-96590 
P51344
172 
ccrf4
C 96620-96700 
P25150
173 
ycf65
C 99213-99431
P51351
174 
ccrf5
C 99986-100153 
P17575
175 
ycf80
C 101020-102189 
P51218
176 
ycf84
C 106856-108049 
P45332
176 
ycf85
C 108102-108949 
P45332
178 
ycf24
114386-115837 
P51240
179 
ycf16
115838-116602 
P48255
180 
ycf12
C 116664-116771 
P51385
181 
ycf62
C 116842-117786 
P51383
182 
ycf37
119202-119567 
P48277
183 
ycf52
C 119653-120180 
P51192
184 
dfr
C 143258-145153 
P51392
185 
ycf43
149345-150064 
P51264
186 
ycf59
C 154799-155863 
P51277
187 
ccrf6
155899-155985 
P45949
188 
ycf6
156102-156197 
P49527
189 
petM
156270-156365 
P48366
190 
ccrf7
156389-156604 
P47115
191 
ccrf8
156696-156824 
P53098
192 
ycf9
C 157586-157771 
P49528
193 
ycf19
3546-3821 
P51353
194 
ccrf9
3873-4133 
Q10363
195 
ccrf10
4189-4272 
Q58610
196 
ycf3
4450-4971 
P51258
197 
ccrf11
C 8104-8241 
Q57553
198
ycf4
C 24690-25241 
P49526
199 
ycf49
C 25272-25565 
P15811
200 
ycf10
C 26413-27249 
P51232
 

 

>ycf27 [gene=ycf27] homologous to ycf27 in Porphyra purpurea
MRIENKQNKRQHHLLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIFTTHSIDLII
LDVMMPKLDGYGVCQEIRKESDIPIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEA
RIQSILRRIQTRNAKLKPYDNINLFKTGSLNIDLEKKQIYKNNELIRLTEMEFSLLELLV
SQSGKAFSRSKILKEVWGYKLSKHEPIADTRIVDVHISRLRAKLEDDPTNPTLILTARGT
GYLCRKLIT
>psaA [gene=psaA] [prot=Photosystem I p700 chlorophyll A apoprotein A1]
MNQILKEKEQKTAKILVDRNPVPTSFEKWGVPGHFSRSLAKGPKTTTWIWNLHADVHDFD
SHTSSLEDISRKIFSAHFGQLSLIFIWLSGMYFHGARFSNYTIWLSNPSLIKPSAQIVWP
IVGQEILNADLGGGSQGIQITSGFFHLWRASGITNELELYVTALGGLFMAGLMAFGGWFH
YHKAAPKLEWFQNVESMLNHHLAGLLGLGSLSWAGHQIHVSLPINKLLDAGVDPKTIPLP
HEFILNRELMSQLYPSFEKGLWPFFSLNWGAYSDFLTFRGGLNPITGSLWMSDIAHHHLA
ISVLFIVAGHMYRTNWGIGHSIKEILDAHRGPLTGSGHRGLYEALTTSWHANLAINLALF
GSLSIIVAHHMYAMPPYPYISIDYPTQLSLFTHHTWIGGFCIVGASAHGAIFMIRDYVPS
QHYNNVLDRLIRHRDALISHLNWVCIFLGTHSFGLYIHNDTMRALGRSQDMFSDTAIQLQ
PIFAQWIQSLHTLAPANTAPNALATTSYVFGGEVVAVANKIAMMPMKLGTADFMVHHIHA
FTIHVTLLILLKGVLFARNSRLIPDKANLGFRFPCDGPGRGGTCQVSSWDHVFLGLFWMY
NCISVVIFHFSWKMQSDVWGTVSQNSLVSHVVGGNFSQSAITINGWLRDFLWAQASQVIQ
SYGSSISAYGLMFLAAHFIWAFSLMFLFSGRGYWQELIESIVWAHSKLKIAPTIQPRALS
ITQGRAVGAAHYLLGGIATTWAFFLSRAISIG
>psaB [gene=psaB] [prot=Photosystem I p700 chlorophyll A apoprotein A2]
MATKFPKFSQSLSSDPTTRRIWYGIATSHDFEAHDNVTEENLYQKIFASHFGHLAIIFLW
TSGNLFHVAWQGNFEAWIANPLKVKPVAHAIWDPHFGQAALKAFSRGGVNYPVDISYSGV
YHWWYTIGMRTSSDLYAGALFLLVLAALCMFAGRLHLQPKFKPSISWFKNNESRLNHHLS
GLFGLSSLAWCGHLIHVAIPASRGQHIGWNNFLTTPPHPAGLKPFFTGNWSDYSLNPDDP
SHIFGTSSNSGKAILTFLGGFHPQTQSLWLTDIAHHHLAIAVIFIIAGHMYRTNFGIGHN
IKDILEAHKPPSGKMGLGHKGLFNTISNSLHFQLGLALACLGVLSSLTAQHLYSIPPYAF
ISRDFVTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPKQNKDNVLYRMLEHKEAIIS
HLSWVSLFLGFHTLGLYVHNDVVVAFGNPEKQILIEPIFAQWIQATSGKTLYGFNVLLAS
SSSSATQAAQSLWLPNWLEAINNNNNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALD
ARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLGVFWMLNTIGWTTFYWHWKHIT
IWQGNASQFNESSTYLMGWFRDYLWLNSSPIINGYNPYGMNNLSVWAWMFLFAHLVWATG
FMFLISWRGYWQELIESLVWAHERTPLANLITWKDKPVALSIVQARLVGLVHFSVGYVLT
YAAFVIASTAGKFN
>rps14 [gene=rps14] [prot=30S ribosomal protein S14]
MAKKSVIQRNINRLKLINKYSAQREAIKNEIKRTSKVEKKISLYSNISRLPRDSSKVRLR
SRCWVTGRGRSVYKNFGLSRHMFRFMASNGLLPGVVKSSW
>hisH [gene=hisH] [prot=N-acetyl-glutamate-gamma-semialdehyde dehydrogenase]
MKNIGIINCGMGNLHSVSNAISNIGFNPVIINASKDLVSFACSALVLPGVGSFDLAIDRL
EKKNLIEPVKLWIQEDRPFVGICLGLQLLFEGSDEGSKPGLKIFNGYVSQFKHSLVKKVP
HMGWNKLYFNRFNTIDNLVPHYFHYDLQPWAYFVHSYYIEPKDCYTFNTTSLTFYGKQKI
VSSISYNNILATQFHPEKSGLFGLFILKRFLSSY
>petG [gene=petG] [prot=Cytochrome b6-f complex subunit 5]
MVEVLLTGIVLGSIFITLLGLLAAAKLQYNRKKTN
>psbK [gene=psbK] [prot=Photosystem II protein K]
MIINQLPETYNIFAPIIDIMPVIPILFLLLAFVWQAAVGFR
>ycf9 [gene=ycf9] homologous to ycf9 in Porphyra purpurea
MSILLQFFIISIIFFSLILVILVPSQLSLQSGWQVSKSRFIALFTIWASMILISGFISVF
V
>psaD [gene=psaD] [prot=Photosystem I reaction centre subunit II]
MQQSLNLKMPSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLL
YLAKKEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKID
HNIGKNLNPAEVKFTHKTIF
>ccrf8 [gene=ccrf8]
MRTGLFILINLLLFFVLMNIYFYYNICNVISYIAIINQYLIY
>ccrf7 [gene=ycf44]
MDLAITLSSSLITVLILFLNSQDNSSNALTHSQKNINDFQDNKLRIELLIWLLCITFLGL
LLIKAKIQQSL
>petM [gene=petM] homologous to ycf31 in Porphyra purpurea
MSQEIVTVSLIISILVLSGLTMGFILLKIQK
>ycf6 [gene=ycf6] homologous to ycf6 in Porphyra purpurea
MNISLVDLTWACLMVSFTVSLALVVWARNGF
>ccrf6 [gene=ccrf6]
MFFKYLNKYKRLTKLVELDLIQAICQAY
>ycf59 [gene=ycf59] homologous to orf349 in Porphyra purpurea
MVLNANHLQTKKTIKETLLAPRFYTTDFDEISRYDISSNFEEIEAIVNEFRSDYNKKHFI
RDEEFDRHWSQIDAQTKQMFVEFLERSCTAEFSGFLLYKELARKLKEKMPVLAEGFLLMS
RDEARHAGFLNKAMADFNLTLDLGFMTKNRRYTFFKPKFIFYATYLSEKIGYWRYITIYR
HLEKHPEHRIYPIFKFFESWCQDENRHGDFFAAIVKSQPYLLEGFISKLWCRFFLLAVFA
TMYLNDCQRGEFYKSIGLDPRQFDIYVIQKTNESAAKLFPTVLDLDNPRFFECLDKCACY
NKLLLEIDDREQPFFNQVLNVFYKFYLYFLLVLNFIMLYFLRTVNCNSFTRMVK
>rpl35 [gene=rpl35] [prot=50S ribosomal protein L35]
MNIRKNSKSVSKRFKVTSNKLILYKPASKSHLQEKKTVSRKKRLCRVKRIKVVDSKSIKL
RYMF
>rpl20 [gene=rpl20] [prot=50S ribosomal protein L20]
MVRVKRGNVARKRRKKILKLASGFKGAHSKLFRVANQQVNKSLRYSYVGRKLKKRRFRRL
WILRLNAASREEGLNYSKLVNSLKLLRIQLNRKSLSQLAMIDNDAFKRLVASSRV
>preA [gene=preA] [prot=prenyl transferase]
MKVNSKTLQSVKEDLLNIEQTLNKLIKVNNPILSAAAKHLLIVESKKIRPAIVLLVAKAI
DKNKKIKTSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSVNKTFGNKIAVFAGDFLF
AQSSWYLANINNLEVVKAISKVITDLAEGELQQNLTQFNTYYSIIKYLEKSFNKTASLIA
ASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGKMTTSDLKLGNL
TAPVLFALTKNSKLFKIIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIEAAINSIK
DLPTSSEKDSLIEIAYDLLNRYK
>odpA [gene=odpA] [prot=pyruvate dehydrogenase E1 component, alpha subunit]
MPNRQDCNLEANKISSQLALTFYYDMLLGRGFEDACAQMYYRGKMFGFVHLYNGQEAIST
GVIKSLKTTDYVCSTYRDHVHAISKGVPPRSVMAELFGKETGCSRGRGGSMHLFSSFHRF
LGGFAFIGEGIPIALGSAFKSMYSQQVCKSVQELDVTVCFLGDGATNNGQFFECLNMAGL
WNLPVIFVVENNQWAIGMHHRSTSQVEIYKKAAAFGINSCEVDGMDVVAVHKTAKEAILK
ARKGDGPTLIEALTYRFRGHSLADPDELRSKNEKDIWISRDPIKNFQSYVIRNKLLSQKQ
LIKVKDEVTQTINDALQFAIISPEPKLQDLHKYVFTH
>odpB [gene=odpB] [prot=pyruvate dehydrogenase E1 component, beta subunit]
MSMMFLYEALRAAIDEEMGKDSNVFIVGEDVGHYGGSYKVTKDLHVKYGDLRVLDAPIAE
NSFTGMAIGAAMTGLRPIVEGMNMGFMLLAFNQISNNLSMLQYTSGGNFNIPVVIRGPGG
IGKQLAAEHSQRLESCFQSIPGLQIVACSTAYNAKGLLKSAIIEKKPILFLEHVLLYNLK
GFVPDEEYYLPLDKAEVVRSGSDVTIVTYSRMRYHVLAAVEKLVLNGQDPEIIDLISLKP
LDLHTISKSIKKTHKIVIVEECAQTGGIAAELISLINTYLYDELDSPAVRLSSKDVPIPY
NGNLEKSTLIQPDQIVDVVTNLLQYKT
>petA [gene=petA] [prot=cytochrome f]
MKHTNSKQKLKDIINFCQAIFTLCIICLYQANISNSYPIYAQQTYENPRESTGRIVCANC
HLAQKNIYIEAPKEVLPNTVFETVVKIPYEFNKKQILGNGSKGDLNVGAVVILPEGFKLA
PKDRMDEKLLKKTKNLYFNNYSQKLDNIIVIGPITGKDNQEITFPILAPDPQINKNTHFL
KYSIYVGANKGRGQLYPSGEKSNNNPIPSNAEGRIEKIKPNEDGGYEVIIKTKDDETISQ
YVPIGLNLTIKEGQRIKAGEYITTDPNVGGFGQSEIEIVLQNPTRLISFIFFSISVLISQ
LFFVLKKKQFEKVQSLNQNF
>ycf43 [gene=ycf43] homologous to orf254 in Porphyra purpurea
MADKKANDSFQMSIYEHLEELRQRSIESIVALLISMVVCSLNINILIELIKQPAIGIKFL
QLSPGEYFFTSIKITLYLGIILSSPIIFYEIIIFIIPGLTKKERRLLIPILIASGCLFVA
GLIFGYIYITPIAVRFFINYGKDMIEPIWSFKEYFDFIILSLFSTAISFQIPIFQILLGS
LKIINSKMMLSVWRYVVVGSTIFSAIITPSTDPLIQLFLSVAVMFLYFSSILVLKLFKL
>apcE [gene=apcE] [prot=phycobilisome linker polypeptide]
MGLRTSSGSPLVKPKLYKTSASNVISLAEKQDRFLNLGELTDLNTYFSSGNRRLDIAKVI
SLNANLIISRAADRIFVGGSPLSFLERPQAAVTLTSDQASSTSIQSTKGLGNGNIFQNFF
KSTSEAPTGFKPINVVRYGSSNMKKSIRDLDWFLRYVTYAIVAGDTSILIVNTKGLRELI
DKACSSSAAIVALKEMKNVSLSLFNYDIESQNIVRLYFNTLVSEFESPASSSKVRKRNSL
DLQGLAIPDIYLVAADKSLRYVMKPNLSNTEKAQVIKACYRQVFERDIAKAYGLSLLELE
SKLKNLQISVKEFIRALGKSTLYRKNFYEGFTNSRVVELAFRHFMGRGLSSLQEFRKYFA
ILSSNGLDALIDSIINNSEYAEYFGEETVPYIRGYGQEAQECRNWGSQFALFKYSAPFRT
IPQFITLFADYTQLPPSQHCYGKLNDPLNIQFGAIFKNSYVNEQSRPVLFPRGSRRILVY
KGAGIFNQLGSPNALEKPPSNVSIAKWSKETDLNFILNAAYLRVFGRYVYEEEKIALRPL
ENEFKRRSISVRDFVGQLAKSDVFRSLYWSRLYICKSIEYIHIRLLGRPTYGRTEINNYF
DIVYKSGFYAFVDSLVNSREYIKCFGNDTVPYDRYSTPEAVSSSIFRLSFINSVSYKSLK
PKIEKFIQLGVARDAKSLSSLNSKVFQGVSQARSQKRVFKVSDYSNVMNLRIVFYAALRQ
VFERNIEPYIKGGEFKDIESLFLSGKISVRELIKEIGSSSLYRKEFYIPFPNTQVIEFCT
KHFLGRAPKNQSEIRYYNQVLAVQGLREMINYMINSKEYLSVFGDDIVPYRRFPTLPAAN
FPNTQRLYSRQTKQNRNIVVPSFSGLLNTV
>apcA [gene=apcA] [prot=Allophycocyanin alpha chain]
MSIVTKSIVNADAEARYLSPGELDRIKSFVMSGQRRLRIAQILTDNRERIVKQAGQQLFQ
KRPDIVSPGGNAYGEEMTATCLRDLDYYLRLITYSVVAGDVIPIEEIGLVGVREMYNSLG
TPLSGVAEGIRSMKSVVSGLLAGDDAAEASFYFDYAIGAMQ
>apcB [gene=apcB] [prot=Allophycocyanin beta chain]
MQDAITAVINAADVQGKYLDNNSIEKLRSYFQTGELRVRAAASISANAAGIIKEAVAKSL
LYSDITRPGGNMYTTRRYAACIRDLDYYLRYATYSMLAGDPSILDERVLNGLKETYNSLG
VPIGATIQSIQAMKEVTASLVGPDAGQEMGVYFDYICSGLS
>dfr [gene=dfr] homologous to ycf26 in Porphyra puurpurea
MRKFHKLYIHTNIGGQFQTINLLVFIISLLISTSISLFVNSLNNNATVIKEATIHDILAL
INSDFNLHREALVNQRLQSTFFCQTLYASITEFESLAVFSHEGLLYCVPSFNSKDVNKIE
DNFQFSYLNLLQKMFRLNIHFPLIHTSLKGYGRYLTQAFVILNMANRDQPMLFVEVEFTS
NFFYWPLQLFSLVFLMTWFIILLGGILNSLTIIKPIKELLAGIRNISTGNFEQKIFLPFE
GQIGELIFSFNNMAERLKNYDYKSKEELSSAKAKAEVLVSTIADGAILLNDKLEIILINS
KAKEIFNCEFLDLLGVGIDRFLPKNLQSSVMPSLKHLAKSTHVDFLPVVLSGLDLVFPAK
GRRKIKIFLNQVLSKSNNKVLGISLIIRDITQEVELSLAKNYFISNISHELRTPLFNIKS
FVETLEDYDRILTRKQKLSFLKTIHKEADRLTRLVDNLLNLSAIKPKQNNFLHSFYLFNL
RILIYDTILPYQIKLQNKKIITYVELENGLPEIFANYDLLFQAVSNLINNAIKFSYIGSL
ISIRVFTLKKRQVGGVSIVRVEISDSGIGIDMSRSSEVFERFSRIDNKSYALQGTGVGLF
LAKNIIEQHHSRILMHSQLSYGSTFFFDLTF
>argB [gene=argB] [prot=acetylglutamate kinase]
MNNKSIRTQILIEALPYIQQFRGAIFVIKYGGAAMKDLISKERLIADIVFLSCIGLKLVC
VHGGGPEINFWLNKMNVESKFHDGIRITDELTMQVVEMVLAGKINKELVSLLNNKGVKGV
GLCGKDGTILTARKAQCGSIDMGLVGEIKSVDPYLILTLLKENYIPVIASVGADETGKTY
NINADFVAGEIAASLGAEKLILVTNTSGILADVSQPESLIRDTNIMQLRQLLSRGIISKG
MIPKVNCSIRSLAQGVRAVHIIDGTKPHSLLLEVLTNNGIGTRFLYKQSILLQLNCFSFS
NVSI
>dnaK [gene=dnaK] [[prot=Hsp70-type chaperone]
MEKIVGIDLGTTNSVIAVMEMGKPAVIPNSEGFRTTPSVVAYAKNGDLLVGQIAKRQAVI
NPSNTFYSVKRFIGRKFEEINEENRQVTYQVNKDPSGNVKIYCPFKNKDFTPEEISAQVI
RKLTEGASKYLGEKITKAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLAYG
LDKKNNEKILVFDLGGGTFDVTILEIGDGIFEVLSTSGDTHLGGDDFDKKIVDWLVDEFK
KSYNIDLSKDKQALQRLTEAAEKAKIELSSVSQTEINLPFITATSEGPIHFDKSLNRAKF
EELVSELIARCKIPVENALKDAKLNKSDINEIVLVGGSTRIPAIQNLVKESLQKDPNQTV
NPDEVVAVGAAIQGAVLAGEVKDILLLDVCPLSLGVETLGGVMTKMIPKNTTIPTRKTEI
YSTAVDNQTNVEIHVLQGERELAKDNKSLGTFRLDGIPPAPRGVPQIEVTFDIDANGILS
VTAKEKTTGKQQSVTITGASTLDKDEIQKIIKEAEINAQEDRKKKENIELKNQAETICYQ
AQKQLNEFKEKIDKNQYKRIEDLIAKLKQAISSNEYEEIKNLMEAIQKETMEIGKELYSK
DSKNTKNSDVIDADFSET
>rpl3 [gene=rpl3] [prot=50S ribosomal protein L3]
MKNVDFCTFGVKLGMTQILDNFGNLVPVTIVSQPKPCVITRVTTSLNSQQKLIIQIGCYS
DFRANKPTIGYFKKQSVPNLRYLHEFQTYKNNEYQVGKSLDLKELDQQLVQVSAYTIGKG
FAGYQKKHKFSRGAMSHGSKSHRRPGSIGAGTTPGRVFPGVKMAGRLGFSRRSIKNLLVL
KVDLTNKLFLLKGSVPGKYGNLLLVSLKKTNYFLD
>rpl4 [gene=rpl4] [prot=50S ribosomal protein L4]
MKFMVTEQKTLIYPVINLITGQHNYIGFKCRISTNNANYVVHRVFSIQNKLSREHTASTK
TKSQVRGGGKKPWKQKGTGRARAGSIRSPLWRGGGVVFGPKPKNVFFKINKKEIRLALYT
VLSNALPKTTVVSSLEGLPNFISTQALIKFLRSLNVSLDNRVLIVVEKKETPLFLSCRNI
KNLALIQADHLNVKSVILAQSLVVTLQALKIIYKTFNDN
>rpl23 [gene=rpl23] [prot=50S ribosomal protein L23]
MAKIISSELPDLILSSVITDKTIKLLETKNYTFLAPKEVSKIAFKRAIEDMFKVKVNSIN
SLNLPNKKKRVGRYKTGSLPLYKKMIVKLDSKDTIDLFLDR
>rpl2 [gene=rpl2] [prot=50S ribosomal protein L2]
MAIKKYKPYTPSMRGRVLASDFFDLSEKKAPKRLSFGIKSISGRNNQGKITCRHKGGGHK
RKYRLVDFKRCKTGVLAKVSDIYYDPNRSAHIALLNYLDGEKSYIISPNLLKVGTYVVSG
KEASPDIGNALPLNCVPLGFEIHNIELIHGKGGQVARAAGTSAKLIAKSQDYVTIKLPSG
EIRLFRGECYATIGKVGNIDHNNEKIGKAGRNRWLGIRPTVRGSAMNAVDHPHGGGEGRS
PIGRSQPSTPWGRPALGIKTRRNKFSNFYILRRRK
>rps19 [gene=rps19] [prot=30S ribosomal protein S19]
MSRSIKKGPYVHFKLLKNTNNLNLSNSKRVIKTWSRSSVILPSMVGHTIAVHNGKIHVPI
FISDQMVGHKLGEFAFTRSFRSHAKIDKKIRK
>rpl22 [gene=rpl22] [prot=50S ribosomal protein L22]
MKATIRFIKISPTKVRRITNQIKGLKYADACILLKFMKGRIAKTILKLVNSAFSNSRYST
FADLRIQTVLVEKGPIFNRFQPRAKGRAYPIKKYTSHIKVVLS
>rps3 [gene=rps3] [prot=30S ribosomal protein S3]
MGQKINPLSFRLGINKLHHSSWFARPQSYTAILQEDKKIRDYIFTNLLRASISRIQINRQ
FNQVELQLHTSRPGVIIGRSGTGIDSLKRNVKNLLSKQSQLKINIIDVTNPDIDAVLLAC
FISQQLESRTTFKRAVRQAIQRAQKSDIPGIKIQVSGRLNGAEIARTEWIREGRVPLQTL
KADLDYATSSAYTSFGVVGVKVWIFKG
>rpl16 [gene=rpl16] [prot=50S ribosomal protein L16]
MLSPKKTKYRKFHRGRLKGHATKGSALAFGRYGIQALTSSWITSRQIESVRRVIVRHLKR
GGKLWIRIFPDKAVTAKPLETRMGSGKGSPEHWIAVVKSGHILFEIDGVSLELAKEAVKL
AIYKLPIKCKFLSNDEFAKD
>rpl29 [gene=rpl29] [prot=50S ribosomal protein L29]
MSLPKIKESQDLTISDLQRETSSVRKSLLILRLKKSARQQIKPHLFIHLHHKLSQLLMLQ
SIKSKYK
>rps17 [gene=rps17] [prot=30S ribosomal protein S17]
MSAKEIIGIVITKSLDKTAIVKTQSKSSHERYVKIIKKVKKYTVHDRENISRVGDKVIIL
QTRPLSKTKRWVIKSIL
>rpl14 [gene=rpl14] [prot=50S ribosomal protein L14]
MISVHTRLKVIDNSGGKEIMCIRVLGTNRKYATLGDVIIGVVKNAVPNMPVKKSDVVRAV
VVRIKKTINRKNFFSVRFDDNAAVIIGSDGNPKGTRIFGPVARELRDKNFSKIASLAQEV
V
>rpl24 [gene=rpl24] [prot=50S ribosomal protein L24]
MINVRVINKKRRIQKYKVSVKSGDTIKVISGKYKNIVAKVLRVLKYSNEIIVKGVNIKIK
HIKPVRDNEMGSLKSLEFPINISKVVLLESRKKE
>rpl5 [gene=rpl5] [prot=50S ribosomal protein L5]
MSGGNLQHLYFNKIRVELQKQFEYTNVHQIPKLTKITLNRGLGTLYQQSPKVFESSVSDL
MLITGQKPRFNKSKKSIAGFKLREGTVVGLSVTLRRKKMYAFLEKLIHFSLPAARDFRGL
STKNFDGLGNYNLGIKEHAIFPEIDFDKIDHSYGLNICIVTTANNDIEGKALLKFLGMPF
KD
>rps8 [gene=rps8] [prot=30S ribosomal protein S8]
MVNDSISDMLTRLRNAICAQHKVVQVPLTNINKNILKVLQKEGYIKNFEILFERKSGYLL
VSLKYNSLNQDKPCLSVLKKISRPGLRMYVRTKKIPKVLGGTGIAIISTSKGVMTGSIAR
NLGIGGEILCYIW
>rpl6 [gene=rpl6] [prot=50S ribosomal protein L6]
MSRIGKKSILLNQNVQVDIKDQVCIVKGQKGTLQRKLPCNVELIKRGPELFIIPVDLDTV
KKRRLHGLLRTLINNMVIGVSIGFSKKLEIHGVGYKAHIADQHLVLTLGYSHVIKFLPPE
GVSLLVENNNIVLVKGIDKEKVGLASACIRSIKPPEVYKGKGIRYAGELVRRKLGKASKN
Q
>rpl18 [gene=rpl18] [prot=50S ribosomal protein L18]
MRYRLLVHLSNNHVYAQIIDDLNNRTVLSVSTLTPQVKSKLSITCNKKAAELVGEYVAQQ
ALNFGIRNVVFDRGRKLYHGKVEVLANSARSFGLKF
>rps5 [gene=rps5] [prot=30S ribosomal protein S5]
MSRDTSANSSGQQNYTWSERVIQITRVTKVVKGGKKLSFRAIIVIGNNQGSVGVGVGKAS
DVIGAVKKGVSDCKKQIIEFPLTSSSTISHAVEGRFGAASVILKPSVQGSGVIAGGAMRT
VIELSGIKNIVAKQLGTKNHLNNAKATINALSKLNSKSSQLSLMSFSN
>secY [gene=secY] [prot=Preprotein translocase subunit]
MRPENNLRLRLFQTMKFIALERLGLFVPIPGIDQKLFSSDYSNNAISNLLNVFDNNQAPK
LSVFALGIIPYINATITIQILSSAFPALKKLQSEEGEIGKKKLNKITKYLSFCFAFIESL
AIVLRLQKYAFDWNLYFIVQTTLILISGAMLVMWLADNISYKGIGTGASVIIFVNIASAF
AKFLLNQLFVHSIKFLDFASYFALIVFSIACIVFVQEAIRKVPIISAKQLDSTSFYSNDY
FLPLRINQGGVMPIILASSLLALVDYVIRYGLSTLQAVYFINDILPFKILFLLLYSAFII
FFNYLYCSLVLNCFELSNNLKKASVVIPSIRPGKMTEKFFKDTLDNLTLFGSGFLAFIVL
APNFLEFVFHIRVFKGLAVSSLLIVVGVAIDLIKQSKTYVIAKNYENMVH
>rpl36 [gene=rpl36] [prot=50S ribosomal protein L36]
MKVRASVRKICSRCVALKRHGVLIVLCSNPKHKQRQG
>rps13 [gene=rps13] [prot=30S ribosomal protein S13]
MVRIAGRELPTNKRVDIALNYIYGIGPWRSRQILKELKVDFSTRVKDLLVGEIAAIREYI
ERNYVVESDLRRFELLNIKRLIEINSYKGKRHKMLLPVRGQRTRTNARTRRGVKRIIDLK
GV
>rps11 [gene=rps11] [prot=30S ribosomal protein S11]
MLKQSKKSSKKLKKSVIDGLIIINSTFNNTIVTATDCYGKVIAWASGGTEGFKGAKKGTP
FAAQSATEKLIKALLEQGTQRIHISVSGPGPGRETSIRSFQTSGLQIISIKDITSVPFNG
CRPPKKRRI
>rpoA [gene=rpoA] [prot=DNA directed RNA polymerase alpha subunit]
MLGKVNGVQIECLESMVINSREIYGKFMIEPLSYGQAITVGNALRRVLLSDVPGVTIVSV
RIAGINHEFSTVKGVKEDVLEILLNLKNIVLKGNVLKNQIGRLKVQGPAIVTSGQIEFPL
DITVVDPCQYIATISGNDYLEMELKVEKSSGYKLVETFSKKSPLDFLPIDSIFMPVKKVN
YYVEEILDSKVAYEKLILELWTNGSLSPQQSINYASDNLVKLFNPLRVLDFSKESSSVYE
QNSLIKQKLIEELCLSVRAYNCLKRVQVDSIGDLLEYSIGDLLEIKNFGQKSVEEVSKAL
YKKFGVKLKH
>rpl13 [gene=rpl13] [prot=50S ribosomal protein L13]
MKNPIRMQKDYKLPVWYLIDAQDQILGKIATKAAIILMGKNRSTYSYNSMSANFVIIINS
RQVAITGNKNTQKVYKRYSAKPGATKTESFYHLKKRIPNRILEQAVKGMLPKSVLGKKMF
SHLKVYAGDSHPHLAQQPIQLSI
>rps9 [gene=rps9] [prot=30S ribosomal protein S9]
MLSYSTGRRKCAVAQLRFFSGNGKIVVNGCSLDYYFQHNSAFTKIIRSPLKLLNLELLYD
FIIVVKGGGLSGQAGAIRLAIARVLAGLSPSNRSSLKSKRYLTRDSRIKERKKYGLKKAR
KAPQFSKR
>rpl31 [gene=rpl31] [prot=50S ribosomal protein L31]
MAKKNIHPQWYEEAKFYCNGEIVKIIGSTRMEINADIWSGNHPFYIGTQKIVDTEGRIDK
FIRKYNLNSENSESL
>rps12 [gene=rps12] [prot=30S ribosomal protein S12]
MPTIQQLIRFERKQIVGTSKSAALESCPQKKGVCTKVYTTTPKKPNSALRKVARVRLTSG
FEITAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGALDSTGVKNRLRARSKYGAS
KPKK
>rps7 [gene=rps7] [prot=30S ribosomal protein S7]
MSQKDPYKTYRLVSDPFYESPLVTLLIMHVLRNGKKSISQRIVYSAIENIAMKVKEDPLE
IIERAIKNVIPAVEIRSRRIGGSTYQVPTEVRVHRGISLSIRWVIKFAKIRPGKSMSLKL
ANELLDASKNLGNSIRKKEDTHKMAEANRAFAHYRY
>tufA [gene=tufA] [prot=elongation factor Tu]
MARAKFERSKPHINIGTIGHVDHGKTTLTAAISAVLASIDNTVKLKKFDEIDAAPEEKAR
GITINTSHVEYQTPLRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREH
ILLAKQVGVPSIVVFLNKADMIDDEELLELVELEVRELLSKYDFPGEEVPFVAGSALLAL
EACLKNPTIGKGKDKWVDKIFELMDMVDKYFPTPERDIDKTFLMAVEDVFSITGRGTVAT
GRIERGAIKVGETVEIVGLKSTASTTVTGLEMFQKTLDEGLAGDNVGVLLRGVQKQDIER
GMVLAKPGSITPHDKFEAEVYVLNKEEGGRHTPFFPGYRPQFYVRTTDVTGNISQFTTDD
GGSAEMVLPGDRIKMTVELIHPVAIEQGMRFAIREGGRTVGAGIVSKILD
>rps10 [gene=rps10] [prot=30S ribosomal protein S10]
MVRPLNDFHEAKVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLR
SPHVNKDSREHFEIRSHFRIIDISSCSSETIEMLMRLDLPTGVNIEIKT
>petF [gene=petF] [prot=Ferredoxin]
MTSYKVKLTNEKEGIDVEINCPNDQYILDAAEEQGIDLPYSCRAGACSTCAGKLISGTVD
QSDQSFLDDEQIKEGFVLTCVAYPTSNCTILTHQEEALY
>petJ [gene=petJ] [prot=cytochrome c553]
MEKQIMFKNIIIVVAVTLCALFTNEHVVYSANLEHGEQIFSANCAACHAGGNNVIMPEKT
LKAEALEANNIKNISAIANQVKNGKNAMPSFSRLSDSDIEDVANYVLSKADKGW
>psbV [gene=psbV] [prot=cytochrome c550 (oxygen-evolving complex component)]
MNRISIYRIKVLAFLFAVSTYVYPASSLELNEEARTVKLNSEGQSLTLNEEQIKKGKRLF
NSHCGSCHVGGITKTNPNVGLDLESLNGANPPRNNINALVEYMKDPKTYDGSESIAEIHP
SIKSADIFPKMRDLSDDDLKVIAGHILVQPKINSEKWGGGKIYY
>accD [gene=accD] [prot=acetyl-CoA carboxylase carboxytransferase beta subunit]
MPNGTKLAKSFLWKKCDSCNILISKFDFYKHDKVCPECNYHFPMYSSERINHIIDLKSWI
PLYNNLLSGDPLGFCDKKPYITRLAENQKITGLDEAVQTGIGRINNISASVAVMDFNFMG
GSMGSAVGEKITRLVEFSTKEELPIVIISASGGARMQEGILSLMQMAKISAALERLQSKG
LLYISILSSPTTGGVFASFAMLGDIILAEPKAVVGFAGKRVVEQTLNEKLPPNFQSAEYL
LDNGFVDLIVKRKQLKKTIHMILDLHN
>apcD [gene=apcD] [prot=Allophycocyanin gamma chain]
MSFVSKTIIEADHELRYLNGAELEILRAYLNSSEKRIKVIKTLRDREKEIISKASRKLFQ
IHPDYIGPGGNASGSRQRALCLRDYGWYLRLITYSIIAGDKNPVERIGLLGVRDMYNSLG
VPLIGMVDSIQCLKDAALAELKSEEEVKLAEPYFDFVIQNMAQ
>psaF [gene=psaF] [prot=Photosystem I reaction centre subunit III]
MKSKVLQRFVLCITASLLFWNLNIATHASTLTPCENSAQFQARLNNNIKKLENKLTYYKQ
NSQEYTSIKQQIEKTKIRFDKYAKSSLLCGEDGLPHLITDGDWQHSGEFFIPSVLFIYIA
GWIGWAGKGYLQYSKTLTKPNENEIIIDLPRALKYMFSGFAWPILALKEFKNGSLLASND
EITTSPR
>psaJ [gene=psaJ] [prot=Photosystem I reaction centre subunit IX]
MDKNLLKYIYTVPVISTLWLLLTAGILIEINRFYPDALFYAF
>ycf52 [gene=ycf52] homologous to orf174 in Porphyra purpurea
VLIVNYINRWLCSSIFLKDLQFTYDKVLFIRVNKESFRLIIQSQGNLNLNLDQLNSLCSL
VGWDKRPLGKLKKVIIESFQVFIISSTLSGAEELLGFARVTSDSAFFAVIWDFLIHPKFQ
KRGLGTLLILEIIKELKKKEIIHIFLFADIKAINFYKRIGFSSHLKTGKAMFWHP
>ycf37 [gene=ycf37] homologous to ycf37 in Porphyra purpurea
MVLAKVYLYQSKFEKAAPKFEKISKKYQNELTKELQSQIFNSLGMCYFNLNDLELSTHYY
LKSIEINNNCTATLNNLARIYEKKKLFCEAKNIYLRVLAINPKNYIARKNLTRLNSRDSR
I
>trpA [gene=trpA] [prot=tryptophan synthase alpha subunit]
MKNSIKNIFESERGLLLLPFVSLGTPNTQINKQAIIAMDKNGANIIELGIPYSDPVADGP
VIQDAYNKAIKNGVNIRKAFKILMNLKGKIKSPIIVFIYYNQLLNYGINKFLEKLIQLEV
QGIIVPDLPYDESQILKKKCTINNIALISLIALTSSFSRIKKIARNAEGFLYLISKTGVT
GGTGKLMNKLKIIIKTIQKLTSKPVVVGFGINSRRQIKQLIEWNSNGIVIGSPCVQILLQ
SSKEVCVIKLSGLIKQIKESTSSTSN
>ycf62 [gene=ycf62] homologous to orf327 in Porphyra purpurea
MKVTILHQKFIRFVYLLDLELIKRKFVLGLSGGQDSLALLKLLCDYRKTYFGLLKLVYCD
HRWRLESIANAQRLYYLSEYSNISFYYFATSTFLSSETQSRTWRYKNLLKISLSFEYSYL
LTAHTLSDISETTIYRLVRNLRISEINNLLFTFLYIKKTLSISRPLASVTRNDTYWLCSL
SYLPLWSDYTNYWLFLSRNRIRQELFPYLKNYFNCSLERYLDGFIYSNKINLITLNIKLK
KILSKIFGYTNDGLYFNVSLFKLLPFFYQHILIRDFHFLFFHNYRSPSQFNRLLFAIALE
KSQKVFIRKQYHII
>ycf12 [gene=ycf12] homologous to ycf12 in Porphyra purpurea
MLNWQVIVQLVFLALIITTGPVIIVYLSTRERNLL
>ycf16 [gene=ycf16] homologous to ycf16 in Porphyra purpurea
MKETSVLTIQNLKACVNEFEVLHNINLQIKTNETHVIMGPNGSGKSSLLKVIAGHPSYKV
IEGKIFVENIDITQATPEERSNLGVFLGFQYPIEITGVNNADFLRAVYNQKRKKQGLKDL
DPLEFLEILSPILDLVSMDQTFLHRNLNEGFSGGEKKRNEILQMILSKPRLAILDEPDSG
LDIDALRSISEVINKLRNQKQCMLIITHYQNLLDYVIPDKVHIMDHGKIVETGDVTLAIQ
LKRKGYKWIKQSTN
>ycf24 [gene=ycf24] homologous to ycf24 in Porphyra purpurea
MIDRKKSSNIQNILNKPYKYGFSTEIQSEEFPKGINEEIIRLMSHKKQEPDFILKFRLKA
YQIWKKMQAPDWGHLHHNEINFNDVLCYASPKLEQGKNKAQTISEEILATFEKLGVPIKP
NNKQPKIAVDAVFDSISFGTTLQKELKEQGIIFCSISEAIKAYPNLIKKYLGSIVPAGDN
YFAALNSAVFTDGSFCYIPKNIRCPVDLSTYFRINNKEAGQFERTLIIADENSFVNYLEG
CTAPQFDTNQLHAAVVELICFKNATINYSTVQNWYAGNNKGEGGVYNFVTKRGVCQGENS
KISWTQLETGSAITWKYPSCLLKGKRSTGEFFSVTLTNNAQEADTGTKMLHFGRQSKSLV
ISKGISGGVSKNTYRGLVKISGSAIYSDNRSQCDSLLIGKGSESNTYPNLHVHNSLSKVE
HEAFVSRIGEEQIFYFQQRGINIEEALNMIVSGFCQDVCNKLPMEFALEANKLLNIKLEG
SIG
>lpxC [gene=lpxC] [prot=UDP-3-0-acyl N-acetylglucosamine deacetylase]
MYNYTIYHPVKISGRGLYTGINSTITIYPELPHVGIYFLRTDLTDYPIVPIIPSTLL
VLNSKLSTVLGFHDDYSIMLIEHLMSAISLSQLTDLKIILEGPEIPILDGSSIIWLKLLQ
QAKIYITSLSNCIIFKSSCTFFIQTKDTFIISFPYTSLAINTGIDFKNCLAIKSQWITIL
DLLINRFELVGIASSRTFGDFNQINILINEGFFQGANLYNALAFQLGNWCNGPLRFICEP
AKHKVLDLIGDLRLLGVYNMFFLIGYKTNHFVNSQLVQFFKKLDK
>lpxA [gene=lpxA] [prot=acyl-UDP-N-acetylglucosamine o-acyltransferase]
MTNIHSTAIVHPAASLGRNVVVGPYSIIGSDVSIGDYTRIGPHVVITGKTVIGCNNQILS
GCILGSVPQDLRYIDSELTGLYIGNNNLIRENVTVHRASGNGVTYIGNNNLIMVNCHVAH
DCQIRNNIIISNSVSLAGHVIIDSCVIIGGHAGLHQFVHVGALSMIAAMSKIEKNVLPFV
VVSGMPAITRTINLVGLKRYGISKTDINYIRLMLENLKVQPLAFDTYSIFKKFKSDNLLK
RNVAVQYFSDFLFNSFRARGFIPFKVPKK
>psaM [gene=psaM]
MITDSQVFIGLVIALVPAILAFKLGLSLYE
>thdF [gene=thdF] [prot=thiophen and furan oxidation protein]
MYKRDTIAAIATCPNGGGVSILRLSGSKSIDVVKTVSLVSSNQCWHSHCILYGWIKDNED
QSFVDEVLILLMMAPRSYTAENVVEIHCHASIVLANEILRILVKQGVRLAKPGEFTMRAF
LNGRIGLSQVESVLKVIHSKTIASAKLAANTLRRGGSERIRRLKHTLSLLLADLEFHIDF
SDEFIDVDSIEDELRSTIQSSLLDIKDLISSYNKVSKLNEGTKVCIIGKPNVGKSSLLNA
IAKRECSIVTNFPGTTRDIVSFETMLGNTLVRLYDTAGIRQSVDEIEKIGISKTELFVDE
CQIVFFVLDAIQGLSSEDSVIFNKLNLMNKNFVILINKIDKKVQRKIDEIYETLKCSNRR
IIEVSAIKNIGLEKLNNCILDLSSKEDFDLPVHFSVNCKYLEILNNIYLILDELYTGSLN
KSVTSYDFIAVELRRVLQGLNQITGDEVVENNVLDAIFSKFCVGK
>chlI [gene=chlI] [prot=magnesium chelatase subunit]
MTSTADVFDKKDQFNFVFPFTAIVGQEEMKISLLLNVVDPKIGGVMIMGDRGTGKTTTIR
ALVDILPDILVVKDDPYNSHPHDVDLMSSEVQALVLNRMNIETCYTKVPLVDLPLGATED
RVCGSIDIEKALSEGKKSFEPGLLAKANRGLLYVDEINLLDDHLVDVLLDCSASGWNLVE
REGISVKHPSKFVLIGSGNPEEGELRPQLLDRFGLHAEIKTVKDPELRVKIVEERTEFDK
DPVAYIRKFSKSQDELREKIINAQNLLPKVEMPRELKFNISKICGILDIDGLRGDIVTNR
ASKAYAAIQQRNVVEIGDIQKVIVSCLRHRLRKDPLEIIESGEKIQKAFTNIF
>infC [gene=infC] [prot=initiation factor 3]
MLGGELLKYKSSKESHILINENINFPCVRVVDVTGKQLGILDTRQAVEYAKNQGVDLVLV
NEISDPPVCKLIDYGKHKFIVEKRVKEGRKKQSGALVKEVKMTYKINEHDYETRLNQAFK
FLKSGNKVKVTLTFKGREIQHLSLGTMLLNRLMTDLQQIAEVKRSPYQDGKTMILILTPK
IVDPQ
>ycf85 [gene=ycf85] [prot=ABC transporter; putative] homologous to slr0251 in Synechocystis sp.
MNMRLFAYDINKKIATRQILDGVTLSLKQGEIIGLLGPNGSGKSSLFSIMAGIEKPSSGA
IYINHCDITKYEISERSGLGISYLPQESILLINLSVAQNLLAAMEGRKFSYAEKLKKIKY
VLDLFKISSLANNLCSSLSGGEKRKVEIAKSVVNNPFFLFLDEPFSGVDPMSISEIRRLI
QTLSLSNLGIVITDHNVSEVLQTIQRGYILFSGKLLANGSRHELFANEEVRKKYLGYDYD
THNI
>ycf84 [gene=ycf84] homologous to slr0882 in Synechocystis sp.
MALLLSELLKITTQLIQYFIDFTILDSYLFKSLVLPFLFCWVSFVFIELSVGCVNQLMSD
LSSGLPLEISLQILLLYLPLYAYFALPITSFFSGLISFRIKNYSNQLLGVYITSISFSRL
FRSVLIFTSAICGTTWCISEIIIPVSSNSLQVLHRKASLCARNSICSETSSGIFTNYYNS
QSKKAPLKELKGVLYIKHFNHLNAYQLIYLDFNNENLKQLFLADSAKFDHFSRNWLFENM
HIFSFDYDKELFVDSFNINMNLCNLSILDLKLNAVINKSQFSPFWMNAASIKMYKELSHL
KTYSKSWRKLSLRLYQKYFTPISSIFLYSTGALMGSFRYKTQYLSFFIGILIAFQFYLST
FVTESAVILGIIPIYFSFIVPTSLTVILLLVLRRISL
>ilvH [gene=ilvH] [prot=acetohydroxyacid synthase small subunit]
MKYTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQKGISRITMVVPGDDRTVEQL
TKQLYKLVNILKVDNITEIPCVERELILVKINASTSSRPEILSILQVFRAKVVDLSENLL
VLELTGDPGKVAAIQQLLQKFGIIEIARTGKIALTRTSKVNTEFLKSISMEI
>CfxX [gene=cfxX] [prot= rubisco expression protein]
MGITPTALEKTDKHTLVNLQEEFNKTKIQEVLDDLNQELIGLKPVKNRIREIAALLLVDR
LRQKVGLSSSNPGLHMSFTGPPGTGKTTVATKMADILYKLNYIKKGHLVTVTRDDLVGQY
IGHTAPKTKEVLKKAMGGVLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQREDLVIIF
AGYKEKMDKFYASNPGLASRVANHVDFPEYRPEELLKIAEMMLQEQQYQLTKEAELVFLD
YIKKRMLQPHFANARSVRNAIDRARMRHANRIFNLSSKIVTKSNLTTIQAEDILKSRLFN
T
>rbcS [gene=rbcS] [prot=Ribulose bisphosphate carboxylase small chain]
MWGLPLFDVKDPAAIMFEVEACRKEKSNYYIKLLAFDSTKGVESTAMSFMVNRPAHEPGF
VLRRIESNDRVQRYQIHSYATEKPEGERY
>rbcL [gene=rbcL] [prot=Ribulose bisphosphate carboxylase large chain]
MAQSVQERTRLKNKRYESGVIPYAKMGYWDPNYVVKDTDILALFRVTPQPGVDPIEASAA
VAGESSTATWTVIWCDLLTACDVYRAKAYRVDQVPNSPDQYFAYIAYDLDLFEEGSIANL
TASIIGNVFGFKALAALRLEDMRIPIGYLKTFQGPATGVVVERERLNMFGKPFLGATVKP
KLGLSSKNYGRVVYEGLKGGLNFLKDDENINSQPFMRWRERFLYVMEGVNRASAATGEIK
GSYLNVTAATMEEMYNRAACAKEVGSIIIMIDLVIGYTAIQSMAIWARENNMILHLHRAG
NSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPIIVKGFYNTLLLPKLDVN
LPQGLFFEMDWASLRKTVPVASGGIHAGQMHLLLKYLGDDVVLQFGGGTLGHPDGIQAGA
TANRVALEAIVLARNEGRDYVNEGPQILKEAARTCGPLQTSLDLWKDISFNFTSTDTADF
VETPTANV
>trxA [gene=trxA] [prot=thioredoxin]
MPSPIQVTDFSFEKEVVNSEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINT
DENPSISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL
>rpl28 [gene=rpl28] [prot=50S ribosomal protein L28]
MVNLHYKKIYSYKMQCHIKVRISTKAIKLLKKNKIEKILKTSHLSIKQKFIK
>ycf80 [gene=ycf80] homologous to orf450 in Porphyra purpurea
MFPNIVNLKIWPVELAYSSLNKDFVSLSAEKEINNKIEETIESHCLKKQGIRIRSPYGLR
TLKVLQACPKKEDLVLQRGCIKIALPFSGILSSYQSKCQYMQGLNNHLRNTLNNVVVYVV
TNSSDELVSVASRSLMYRGRGISLVDLIIDLYYRYFVLDKYNLTNVVGFVFMDYEDSNLF
LRTVLQNCYDKDKKAAVQKLKLGEACKLFFNPLNGIKVRFIPSSKELEKLFSVYQNEFDH
ISLHADQRFTPNSYSGVPVYLVSNKWLTNKSLVTLNPSLSTLLSHDFVFFTYLDALKFCN
IIEDLLLYGNKEVESKPSIVLFNFEEILLHLKDVASLQTKVHFLPPYSVCDNEKLILAEL
KKVGSSTNPASTTWEYLSVILNSDLNNKN
>rps4 [gene=rps4] [prot=30S ribosomal protein S4]
MSRYTGPKIRIIRRLGELPALTTKKVKNNYPPGREWSTNEELSEYAIRLQEKQKIRFNYG
INEKQLRRYVKKAKKSRGSTGSYLLNLLEMRLDNIVLRAGLAPTIAASRQLVSHKHIEVN
NKIVNIPSFQCSIGDTIHVKKSNKSRQLIDLNSRRDTTKFFPKYLEVNKDNMGARVVKTM
DKQDVNLTINELLVVEFYSRKG
>ccrf5 [gene=ccrf5]
MSRDITGVFLFTFAPWLDNCCISLWHFPVNDRLGITQLLMSLTKSPDFPQVVKLN
>rps16 [gene=rps16] [prot=30S ribosomal protein S16]
MIKIRLKRYGKKNRPTYRIVLIESQKPRDSKTIEELGHYDPLLKQANFKFDEIMKRVGQG
ARLTSRVRYILKQFS
>ycf65 [gene=ycf65] homologous to orf99 in Porphyra purpurea
MTYYYFWPRTDAWEQLKIELDSQPGLFAKDKVVILNQVTRIIDYWQENKKSVFPNLSELQ
SHFPDLICSGCY
>groEL [gene=groEL] [prot=60 kd chaperonin]
MSKRILYKDQARKALERGIDVLAKAVSITLGPKGRNVVIDKKYGAPQIINDGIAIAKEIE
LKNHMENTGVSLIRQAAAKTNDVAGDGTTTATVLAHAIIKQGLKYVSTGSNPISLKKGIE
KASQFIIQKISENSRPIEDVKSIIQVSSISAGNDEEIGSMIANAIQKVGKDGVISLEEGK
SAITELEITQGMKFEKGYISPYFITNSEKMEVVLENPYILMTDKKITLVKEDLLPVLTLI
NKTNRPLLIIAEDVEKEALATLVINKLRGIVNVVAVRAPGFGDRKKALLEDIAILTNGQV
ISEETGLNLETITLDVLGQARRATILRDSTTIVEDKNQQAVHARCEQLKNQLLIAKSSYE
KEKLQERLAKLIGGVAVIKVGAATETEMKEKKLRLEDSINATKAAIEEGIVPGGGTALVH
ISANLKQWAKINLSSDELLGANIVEQASLAPLHKIAENSGKNGSLIVEALEHKNFEIGYD
ALSNSLVDMYDAGIIDPAKVTRSAIQNAASIASMVLTTECVIVNRDKKNN
>psbW [gene=psbW] [prot=Photosystem II protein W]
MAKIQFIKGIDEQTVPEIRLTRSRDGNTGTAIFSFINPTVFLLHSSSQNYGEITGMYLQD
DEGELSTRNVTANFVNGKPKAVEAVYLIRNKSGWDRLMRFINKYAEDKNMSFYKS
>ccrf4 [gene=ccrf4]
MFVMITITCQLSIDLINPEFHANEAR
>ycf40 [gene=ycf40] homologous to orf71 in Porphyra purpurea
MTNVKTSIRINVNGKPWVCFSNTTLNELINNLRLDKSLIAIERNKKVVSPSLWSKTYLDN
DDTIEIIAIVGGG
>ompR [gene=ompR] [prot=regulatory component of sensory transduction system]
MIFKILVIDDENIVCDAIYSYLVEKGFQVSTCQNAWQAISILTREFFHLIILDIMMPQID
GYQFISLLRIKRPNLELPLILLTAKALTLDRIRGYETGCSIYLSKPFDPDELIAIINNLI
KRHYKLKRPKKSYKLLKKQNVGIKPIKLTEKEQCILNLIAQGVVNKKIKKLTFIGARYVE
NYVSKMLKKSQSNNRSELVIKSIKNKIVI
>ntcA [gene=ntcA] [prot=global nitrogen regulator]
MVLLKTLCANHQDGILIYPKNSVIKIQGLCLLLSGILQHYNMSNHKKCQTLSLIFNWTFF
GSVVGSSDCKIQTKDFYKCVTDVRLLHFSLFELAEVVCSDSILHFDFFKIFNQRIKDIEF
FIVITSHKNIGNRLSHFILLLACYFGIFSAEGIFLNIYISQHDIASILSTTRSTITRLIN
QLRKDNIIRYYRKRLILLKPVKLGYYFSHFKRYI
>petB [gene=petB] [prot=Cytochrome b6]
MSKFYDWFQERLEIQLIADDISAKYVPPHVNVFYCFGGMTLTCFLVQLATGFAMTFYYKP
TTIEAFSSIQHIMTQVSFGWLIRSLHRWSASMMVLMMILHIFRVYLTGGFKKPRELTWIT
GVILAVLTVSFGVTGYSLPWDQVGYWACKIVTGVPEAIPVVGDNVVEILRGGTGVGQATL
TRFYSLHTLFLPALSVIFLLAHFLMIRKQGISGPL
>petD [gene=petD] [prot=Cytochrome b6-f complex subunit 4]
MTIIKKPDLNNALLRAKLAKGMGHSYYGEPAWPNDLLYTFPIVILGTITCCVGLAVLEPS
SLGEPANPFATPLEILPEWYLYPTFNMLRIIPNKLFGVISISLVPVGLGIVPFVENINKF
QNPFRRPIATSVFIFGTVTTVWLGIGATMSIDKALTLGIFF
>rpl12 [gene=rpl12] [prot=50S ribosomal protein L12]
MDKIDEIVEKIKLLSLLEASELVKRIEDTFQVNVSNIQPVTGLSSNLTTTQQTPESAEVK
EKWDVILENVPADKKIAILKVVRSITGLGLKEAKEFVESVPKIIKQSISQADAEHIKQQI
EDAGASVVLK
>rpl1 [gene=rpl1] [prot=50S ribosomal protein L1]
MVKIRSRRFKILQSQISVEKMCEPIEAINLLKSGPKAKFSETFEVHCCLDLNTKYSDQQL
RASVVLPKGTGKRTKIAVITNEAEVNKIKNFGVDIVGSKDLVESIANGFLEFDQLLTTPD
MMPVIAKVGKILGPRGLMPSPKSGSVTSDIYNAIQEFKKGKLEYRTDKSGIVHSIIGKID
FTAEDLLNNLIAIKKSIDQNRPNGAKGKYWKNMYLCTTMSPAIKIDFNKLQELEKNYGQN
>rpl11 [gene=rpl11] [prot=50S ribosomal protein L11]
MIKKIITTVKLALPAGKATPAPPVGPALGQHGVNIMMFVKEYNARTEEQKGSIIPAEIQI
YEDKSFTFILKTPPASILLKQATGIEKATKAPRREQVGSISYKEIQNIAKIKINELNTKD
LSKAIKIIEGTAKNMGISVET
>chlN [gene=chlN] [prot=protochlorophyllide reductase chlN chain]
MIHFFDILTDFDYRMYNRQMILPELGLNGQINIKKSRVLCVGAGALGASSLMYLCAAGFG
RLGIVDFDRVAISNLQRQIIHTYEAINTYKTFSAFNVLKQLNIHIKIDLYTTRLSSLNAV
KLISYYDLVIDASDNFETKCIINDTCQLLKKPMIYAAVLKFIGQISVFNYRGGPSYRTIC
SKLPDSREFASCSESGVIGALPGVLGSLQAIEAVKVIIGKGQVLSGGILTLDVFKMFIRI
FGIVFYKHLMSNNISTTLKSQEDKQRAAHNQELKIFRNILSLSLKDIDLILKMSRYRFKF
LLLDVRTQQEHINIRFLKSSILPYACLENVNKIQCIIPKFACRYDLIILYCQCKTRSLRA
ARALASYNTNLIIIRLHGGVSSAIDHINQMVVSTK
>dnaB [gene=dnaB] [prot=replication helicase subunit]
MKDSFNEYMKIGRLPYNLVVERVILGLIIEGSNPMVDKVKSLIKRSFFFARSHRAIYQAI
FYLYDNNKTIDWMSITFYLVIDTQTSFIIVYNLLKSVREEFARAEHRLALKSNDGAWLFL
VATLAEYEAKRNHLKALSGTKSKINDSSISFRKQLNVLQESVKNLTYGLPYSSNRVETWG
KDIKHCLNSFINELERKLRFEQIDEFLPTGFHQLDQLIGGFRRRDLIVVGGRPGVGKTIT
GLNLASKILQLRTDVTVLFFSSEMPLKDILVRFMIMHSTQDLSFFDLLSGNLNLEKLSTE
QENLGWADKLINLYVEDSFQIELSELRRISVVFKEQHPNLGLIVIDYLQIIRASQETDPS
TKLLQNMRSLQVAQIVESLKLLARQLNVPVVLLSQLSRNAESRPGKTQMLSDLSESGFIE
QQADVVILISQQQKISGFMTPPPQHKSVVVPFNLTVAKNRNGPTGEIHLGLYVKKMMLVS
IKSSLSGFN
>ccrf3 [gene=ccrf3]
MFLFNTLIISIIRLPLNISIGKTEQLIPIDISVILC
>clpC [gene=clpC] [prot=Clp protease ATP binding subunit]
MNIQPNTFFLKAMLTLLNIKGNNMCWAHKKNMFERFTEKAVKVIMLAQEEARRLGHNFVG
TEQILLGILGEGTGLAAKALKSMGITLKDARIEVEKIIGRGSGFVAIEIPFTPRAKKILE
LAIEESRILTHNYVGTEHLLLGLIKEGEGVAARVLENLGVDLPKLRSNIIRMIGETSEVS
VGATSGRSKVPTLEEFGTNLTQMAVEGKLDPVVGRAKEIERVVQILGRRTKNNPVLIGEP
GVGKTAIAEGLAQRIINNEVPDTLEDKKVITLDVSLLVAGTKYRGEFEERLKKIMDEIRM
ADNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLEEYRKHIEKDAAL
ERRFQPVMVEEPTVEETIEILRGLRDRYEAHHRLKISDSAIVAAAKLSDQYIADRFLPDK
AIDLVDEASSRVRLMNYKLPPSAEYLDEELRHIQKIKNELIRSGDFEEASQFREREIEVK
VQMAALMKAKKEAIEEELALNPPIVNEDDIANIVSSWTGIPVSKLTKSESEKLLHMEETL
HSRIVGQNEAVIAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKAMASYFFGSE
EAMVRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRKRPYTVVLFDEIEKAHPDV
FNLLLQILEDGRLTDSKGRTIDFKNTLLIMTSNIGSKVIEKKGGGLGFELEENIEELQYS
RMRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVRDIAHIMLREIFERVKQQGISLQV
TERFKNLLIEEGYNPSYGARPLRRALVRLLEDSLAEEVLSGKIKEGDNAMIDVDENKQVK
ILLGNSNNQHAFLA
>rpl19 [gene=rpl19] [prot=50S ribosomal protein L19]
MVNYLSLKNNISSNLFSGHNNINQEPICVGDYIRFGLLITEGTKERTQNCEGLVIAKRFS
NTCCNLTVRTVFQGIGVERTISLFSPKISKIKILKHYKVRRAKLYYLRRKENVKKK
>ycf17 [gene=ycf17] homologous to ycf17 in Porphyra purpurea
MPKYGFHQSTELINGRLAMLAFILSLFIEFITEQKILHFLKFL
>menD [gene=menD] [prot=2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase]
MMDNIWSNAIVEELVRQKITYFFIAPGSRSTLLALAVANNKQSKSIVHFDERSIGYAAVG
FSKSFNTAAVIIVTSGTAVGNLLPCIIEASMSCIPLLVLSADRPYELKFCGANQSIDQNK
IFGNFTRWFFEIPPPEEKIKIKAIISAIDYACIKMKGDTPGPVHINCLFREPFFHDNKNH
NDTGLIYFREWIHSHEIFNIYTYLKSNSIAKKISIDLQRILNLRNGIIILGNIEDLQLVH
LINKISYLLDWPILPDILSRSRVHHLNDNFINYYNLILKRYTIESPEVVLQFGPRTVSKE
LDIYLSYDKCINFILIQDICNRFNVNHLRSNSLICNPKVFCLNCLTYLNNNKIKLEYKKR
KKWLSTWSNYNQIIHFSLCKYFSNFRILSEPAVVRSLLQHWPENYVGYLGPSMPIRDSDI
FCEGNTQDSTNSTINLYSNRGASGIDGNIGTSLGISVGTKQKVLSLLGDLSFLHDINSLK
VVDKLPDKPILVIYNNNGGAIFSFLQINNIHKDVLTKFFYAPHNLSTFEHIAYQFSLNYK
KIQNIYALVKLLNLYGNKNEAIILEIESSIKQNLSDHSLIDQYLKKLAFEEN
>menF [gene=menF] [prot=isochorismate synthase]
MNTSYKMKPIGLNKIKFNINILKTQKKYFYVIRIGIAIKRSKMNLISWLNSQQEFPKIYW
KNRNSKIEVASSKILALFYRFKHMISFGYLRGNTKMATRFYIIQPFMSSKNKNTLVTAWE
ELITKNITLPKIEIIKFCLSTYIGLNLLNKVERQQLNEIFTQEFVAYKNKIKSASSIRTI
TYSQCLKNWTNEIKQSFKHIKHNSLEKIVLARRKILEFETDLNSLSIIQQLKHKQYNSYN
FGLFINTNCGFIAFSPERLYKRKTNIITSEAVAGTRLRGRTQKHDLRLAFNLICSCKDFN
EINIVKQYLVNKTKNIGNIVKVQLHYSIMQTSNVQHLYSRLQAKLKSNMSDQKIIRNLHP
TPAICGSPQQAASKCIPLFENFYRTCYASPVGYFNTDNSSMKISIRSAFINKRKILIIAG
CGILNSSIVLKEWNEVENKMNNFNTIIES
>menB [gene=menB] [prot=naphthoate synthase]
MQTIAIKDFIDIKYIKQDQISEIIISRPQVLNAFRPRTINEIIAAFYDSREDSSIGVVIL
SGHGSRAFCVGGDQKIRSKTGYIDEKGRSSLNVLELQRIIRTFPKPVIAKVSGYAVGGGQ
ILNMMCDLTIASENAVLGQSGPKVGSFDAGYGSAYMARIIGQKKARELWFTCYQYDAFEA
YKMGLVNWVVKIEDLDSYAIKLATDILNKSPLAIRFLKSSLNADCDGQSGLQELAGYSTM
LFYMSAEGQEGHRAFLENREPDFSKFNS
>menA [gene=menA] [prot=menaquinone biosynthesis protein]
MLTKNVERFWCFFLASRFQTLLISISSLLFNLSFVYRQYQKIKLVYIILLLCLFVCLQIF
ANFTNDYFDEVSGVESKFRLGPKRFTLRLGSFIMHFYLSVSLLLITFILILLLLSVDYGS
IKHIIFSLMSSGLFICFVYSGGPFPLASLGLGEVLVFFVFGLLQTITFNFVNIASFHFNL
QNYLFSTSSGLLSAALLSVNNARDQIIDIQTLKRITLAARFGINFANFYYYSTIFLCIYL
FVYYIFLHTLIYATFLTLVFISINSWKLAKDALFLDRINFQLISLGSTSLFVFIYSFFIF
STLVLL
>menC [gene=menC] [prot=4-(2'-carboxyphenyl)-4-oxybutyric acid synthase]
MYLLNIKFFRYCVKFKSNVNNKKAKNINREGIVFKIIDLRNNTFIWSETAPLPYFSLDFL
KFSYFEILRFKQIIVSFTFLSWRRLFSNRNLFLKLSEEKIFPCLHCCITLGIYNLIRYRS
KRLVNIRKTTTRLNSLVNFNLLLLNKENNLNTFNQFGNSVIKFKLRNLTFIDVFINFTFL
VKYRNLCCSKKIRLDTNRTFSLEQNFYLFQRLALHNLDYLEEPINQVRDVFALISELNCP
TVLDELSRSFQSLAFDYSNLVGFVIKPSMMGSLRLILDLINLNFLTYKFSILSSIFETNC
SVINFLLLLIDLDLNLPVGFGNSNSLIDDFIVSSQELSIRDGYLFLYLSKNVIVNIKEVV
KLWF
>menE [gene=menE] [prot=O-succinylbenzoic acid-CoA ligase]
MVLTTSTILRWTYFYSLKASRNIVFTSSKSVLTYQEMDNYVQLLSFIFCYLNVKNKNLLI
LTSNTILSIALSFINIYSLNYLIFLSPKVSIQTVLRFIRTKNISALITNKGQSLFGLKQH
SAIRQISWTYFFTTRVALKLLRTYLLYKLLDCENLIVDCNIFNISFLTSGTTGNSKICWH
HFNNYTLGSAGTNKVQFFDHRSKNLLLLPFYHVGGFSVMFRSVIAGGALILFSLLKDPQL
LCLSFYLSYGRYLSMVDTQFYRLLHYPLLIKFVKVGKICVIGGSFFRWDSLASLDSKFNF
SSIFFHSYGLTEAFAQVFFIYFCSNKYYAIHLPYRQSRIRYDNQIVIRGRTLLKNCFIIL
IQAFVKGTQEPSINILSFSSALWFHTYDRVMMFEGGSLNVIGRVDNVFVRGGENISPEEI
ERELNSLRNVSNSLVVPVRYSQIGVISVAFIILSVFNFNISNFTRVISNRLEANKIPERL
IVLVGANSLSGKISRKLIARYLSN
>ycf83 [gene=ycf83] homologues to slr0204 in Synechocystis sp.
MKTLFRNSIELSLEEVDYAGVMYFGKIFLIAHKVFEKFLIKKKLPIATIISRTKYRLPIV
QARADYVRPIHLSDKIDIILYIEKIEISSFCLQYRFFVNQKQLSAIVKLKHVCLSQTLNQ
SIRLPKELLLQLFYTS
>ycf82 [gene=ycf82] homologues to slr1508 in Synechocystis sp.
MKLINLIIHIAWLGKRSPFCGNVTYSDNIITALESRGYKISFFHFSRVLFPSFNKLKDSF
LPCSYKSQVFTLPSFQASKIFLHNLSVINPHLLHASLTLSPLDFLLPDICRQAEIPLIAT
FHPPFISEESRLLTHSQFIVYKMYAPFLAHYSYVIVFSRLQKNFMISLGVSEKKLIIIPN
GVNNLTYLPSYPRLRSQFKVQTIFIYQGRVSKEKNLQDLLAAWVDAKMSIRAKLIILGNG
PILNHLVRNYSSIDGVIWIGSIQDYSKRIEILRKADVFILPSLVEGLSLSLLEAMSCGLT
CVLTDTGGDAEVADPNIGFVLSPANVYAQLRILLPLVVKHVEFRNVLSHRSETRFNQKYV
LQVNVLYLDFLYKILLSKIKQIIY
>ilvB [gene=ilvB] [prot=acetohydroxyacid synthase large subunit]
MNYKKNSLIKTGAFALIDMLVKHKVKNIFGYPGGAILPIYDELYHWEKKKLIKHYLVRHE
QSAAHAADAYARATNEVGVCLATSGPGATNLVTGIATAQMDSVPIIAITGQVSRAFIGTD
AFQEVDIFGITLPIVKHSFVVRDPRDISTIVSEAFYISKHGRPGAVLIDVPKDVGLEEFN
YHDYDSIRDHKPITKYRPIYGPSIRQIEKFKKMLLESKQPILYVGGGAVMSRAQHEIEEL
ASFIKIPVTTTLMGKGSFNEYNPLYLGMLGMHGTAYANFAVSECDLLIALGARFDDRVTG
KLDEFACNAQVIHVDIDPAEIGKNRIPQLAIISDIKIVLKELLSSMKEGTNNMDKNQTQA
WLHRIHKWKKEYPLSIPHDSKLLYPQEVINEISQIAQKAFFATDVGQHQMWAAQFLKVEQ
GKWLSSSGLGTMGYGLPAAIGAKIANPNDLIICITGDASFQMNLQELGTIAQYELDIKIF
IINNQWQGMVRQWQQAFYDQRYAHSNMAKGQPDFVQLANSYGIRGIRVTTSKDLKSKIER
IISTPGPLLIDCIVATSENCYPMIAPGKSNSQMLGLTKQLKTITN
>psbB [gene=psbB] [prot=Photosystem II p680 chlorophyll A apoprotein (CP-47)]
MALPWYRVHTVVLNDPGRLISVHLMHTALVSGWAGSMALYELAVFDPSDPVLNPMWRQGM
FVMPFMARLGVTDSWGGWSITGESVSNPGLWSFEGVALTHIVLSGLLFLASIWHWVYWDL
DLFRDPRTLEPALDLPKVFGIHLVLSSLLCFGFGAFHVTGLFGPGIWISDAYGLTGRIQS
VAPAWGPEGFNPFNPGGIASHHIAAGTVGILAGVFHLNVRPPQRLYRALRMGNIETVLSS
SIAAVFFASFVVSGTMWYGAASTPIELFGPTRYQWDSGYFQQEIEKRVEESLSNGLSLPE
AWSNIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGHELIVRRMP
AFFENFPIILVDKDGIIRADIPFRRAESKYSIEQVGVTCSFYGGKLNNQSFKDASTVKKY
ARKAQFGEVFEFDRTILDSDGVFRSSPRGWFTFGHANFALLFFFGHLWHGSRTLFRDVFA
GIGAEVTEQVEFGVFQKVGDKTTKKQGYV
>psbT [gene=psbT] [prot=Photosystem II protein T]
MEALVYVFLLIGTLVVIFFAIFFRDPPRIAKK
>psbN [gene=psbN] [prot=Photosystem II protein N]
MEKALILSIFIFSLLLGITSYSIYISFGPLSKTLRDPFEEHEE
>psbH [gene=psbH] [prot=Photosystem II 10 KD phosphoprotein]
MALKTRLGELLRPLNSQYGKVAPGWGTTPIMGIFMALFLLFLIIILQIYNSSLILENLDI
SWTTLGI
>psaE [gene=psaE] [prot=Photosystem I reaction centre subunit IV]
MIKKGSQVRILRPESYWHNEIGTVATVDQSGIRYPVIVRFDKVNYSGINTNNFAVNELVE
IQTNSYKAK
>ccrf2 [gene=ccrf2]
MIILITYNYFNYFLLTWFYNQFFKGTKNCYT
>ftsH [gene=ftsH] [prot=cell division protein]
MKKQWKKIVLFVLPVIITLITLSSFLFYNQDVVHNWSSSRMTYGRFLEYIDMNWVKKVDL
YDNARTAIVDIINPDIKGEEQLVRVELPTFSSELVSKLKNKLIDFDAHPSSSNVNLVSWL
SNLLLPLILIITLFFFFRRGNKSSSGPGQAFNFGKAKARFHMEAKTGIVFEDVAGIEEAK
EELQEIVAFLKDSRKFTNVGATIPKGVLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEF
VEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTE
MDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIH
KDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKIIAGLEGSPL
ADSRIKRLIAYHEAGHAVAATFLPHHDPVQKVTLIPRRQAKGLTWFLPNDDQFLVSKSQI
LSKIIAALAGRAMEEIVFGLPEVTIGAANDIKQVTFMARQMVTKFGMSKVGPICLENSSS
EVFIGRDLMGRHELSEEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKET
IEAKEFMRIVEERV
>acpP [gene=acpP] [prot=Acyl carrier protein]
MVTKEEILKKVQSIVSEQLGISKEQVLVDSHFTNDLGADSLDNVELVMAIEEEFNIVISD
IDAEKISNVREAVEFIIDKINNKANA
>ycf45 [gene=ycf45] homologous to orf565 in Porphyra purpurea
MLIFNDLRHFLPVVPRFVYKSLKKHPRKFGLTEIVLDNGRRAEGRWREKTENLTHKKITK
KHLLRCIKKIGIFNEDNRAGIYQTLHRISCIKNRYGNIVGLTYRIGREFIGIGPIIRDLI
ESNQSTLLIGRPGIGKTSFIREISRILSNEIMKRVIIVDSANEISGEGCCPHISTGKARR
MEVQSINSQHEVMIEAIENHTPEIIIIDEIGTEYESQAAISISQRGIRLIGSAHSSDLFN
LAKNPTLCKLVGGIESVTLSDTQAILRKTKKTILERKGCSCFNATIEINKKRTVKVYTSV
EQSIDAILEGRVNNSQIRSMKLNGEITISLNYQDE
>ycf86 [gene=ycf86] homologous to orf in position 85043-85240 in Porphyra purpurea
MLLSFNVGDVIRLSEILNRIPEEMMDYIGDKAIIKGKKILKNNIMVLLIEFKNYARIWVF
IKELN
>accB [gene=accB] [prot=acetyl-CoA carboxylase biotin carboxyl carrier protein]
MLHSSIYWKNLINTFESGCFSIAEVKFIFSNIHIYKNICNPYKNYQLPELARNLQSSKKL
DNAILKQDKKNIIDILSPISGIFYSSSKPGASPFVAVGSVVSKGQTLCIIEAMKTMNEIE
SDSIGKIHQICARNGDFVTKNQVLMKIILEQS
>rps6 [gene=rps6] [prot=30S ribosomal protein S6]
MKTITIPRQNLTQYEIMLIMRPDLPEEKFLKFLSEIKEHAKRNLALEFNLSNRGRRKLAY
AMRKFQDGIYIQFNFLGSGYILNSLIKRLKLEESILRYIVQKT
>ycf60 [gene=ycf60] homologous to orf203 in Porphyra purpurea
MRINLFVNILFGTACIIIFGLVILISYKLYRYIPKRNNSNKVYKEDYPSIMARAISCLIY
FLPLLEGIAQFGIVCIDDHSWIRIIYKNTLAYIVVPYLESPLIGFCIFITLYLIFVRGII
QISKFIKFHIVQALLLYLLDSVIGTVLTSLPLEIGYSFIGDRLADTLLLITFMISIYAGT
DALKGQYSNIPLISEAAKMQSKSTD
>thiG [gene=thiG] [prot=thiG protein]
MLIDSLRVLKIKVARKFYISYFIIIMNKDFCIKNKKFQSRLILGTGRYRSLLEAKQSIEA
SGCDIVTVAIRRINADNIGFIKSLIKLINWQKYWLLPNTAGCQTAEEAIRVANLGQEIAK
QLGQVDNNFVKLEVIPANKYLFPDPIGTLKAAEHLVKQGFVVLPYINSDPILAKQLEDIG
CSAVMPLASAIGSGQGLKNIDNIRIIVEASKVPVIVDAGIGVPSEATQVMEIGADAVLIN
TAVAQCKVPVAMANAMRLAVAAGYEAHSAGRIPIKNYARTSSPNFDRIGQI
>trpG [gene=trpG] [prot=anthranilate synthase component II]
MILIIDNYDSFSYNLVQSVGEINSDLIVLRSDEIDVSKLQNLNIKHIIISPGPGHPDEYT
ICKQVVKFFAPYTPILGICLGHQIIATCYNASIKKSSPVFHGRASKIYCLKDKLFLGIHA
PFTAARYHSLVVDQDKRGLDLTTCLKTIAITREGVIMACKHRYYHFTYGIQFHPESMLTI
QGTKLLKNFLSLSYG
>ycf44 [gene=ycf44] homologous to orf437 in Porphyra purpurea
MVSITLKTNRIFRSCLNLATNLKFSITLFIIICIVSAIGTIIPQDKPKEFYMNTYSLKVL
GMPLWKIIQLLSLEKIFYSNFYLILLLCLSFSLFFCSLKSQFPYLRTSRIIKLNNNNPPT
SPLHESKKIKYNNIASKNDSSCVQLVSQGYKIYTFDKNLDKAGPLLIHLSLILILLGSAI
HAFNDFIAQEMIPIYEVSHIQNVISSGRISKIPQTISLKASAFTVEHENEKVVKQFITNL
AMLNSKGEVLKQGLVSVNHPLVYKQVYIFQMDWKLFGIRVNYGKNKIYEFPVQKIEANNE
QQWSCTIPAKNQSKLILIFKNMSDEFYVYDNNQNFLKIGKINTPQLIRNTYFTVISKISG
TGLQIKKDSSINIVYTGFLLLIIGLVINHKGSKKRT
>rpl34 [gene=rpl34] [prot=50S ribosomal protein L34]
MIQRTLTGTNRKKTKRSGFRSRMLQTEEEKLLILDVMKKRYYLVK
>secA [gene=secA] [prot=Preprotein translocase subunit]
MTIYLCIAFNMVNTYIDYLRLRKYWKILNQIKKHREEIKQLTNNCLKIKTTEFKKRIKSG
ISLDQILPETFAVASEAAERVLGLNPYDVQMIGGIVLHEGKIAEMKTGEGKSLAASFPAY
LNALTEKGVHIITVNDYLARRDYESIGKIFEFLGMKVGLINQYTPISKRKNNYLADITYV
TNSEIGFDYLRDNMATQIKELTQRPFHFCIIDEVDSILIDESRTPLIISGRTKTRKDKYE
LAHRLANFLKKSIHYKIDEKNRTIILSDLGVITCEKILKIKSIYSAQNTWAHFIYNALKA
KELYLKNVHYIVRDQQAIIVDEFTGRIMPERRWADGLHQSIEAKENLQIKEETKTLASIT
YQNLFLLYLKISGMTGTAKTEENELISIYSLPVICIPTYKSMIRKDLPDLIFQTEIEKLK
AVTEECVKMHLLGRPILVGTTNIQKSEILSQLLNQYQIRHNLLNAKPQNVKRESEIIAQA
GRKYAVTISTNMAGRGTDIILGGNLEYIIKNKITSLFKPIILTGNTQYIIIDKSLKSSGN
EIRDINSNILKIINLHRQNPKLTIAEFGNSLNIASKKIKSNNEYILNLRSIYIIFENIYK
KYFDIESKEVKNIGGLCVIGTERHESRRIDNQLRGRSGRQGDVGSSIFFISLEDNLLRIF
GGERISKMMHTFMPSVNEPIQSPLLSRSLDSAQKKVESLHYNFRKQLFQYDQILNSQRKA
IYLERRLILESNEIVAWTMAYMELTIIDILNDQYLYSHRKPRDKVLKNINKIYDLLASPI
SLIKIEKYTFNKKTILKQLKISYDLKKAQIDKTSCGLMKSLERSLILEQIDTNWSEHIQQ
MSFLKEFIGWRGYAQKDPLIEYKNESYILFIKMIRTIRQNILYLLFRAEPTLDFS
>cpcA [gene=cpcA] [prot=phycocyanin alpha chain]
MKTPITEAIATADSQGRFLSNTELQSCAGRFQRAGASLDAARSLTANAQRLIDGAAQAVY
SKFPYTTQMTGPCYASSAIGKAKCSRDIGYYLRMVTYCLVAGGTGPMDEYLVAGLEEINR
TFDLSPSWYVEALKNIKASHGLSGAAASEANAYINYAINSLS
>cpcB [gene=cpcB] [prot=phycocyanin beta chain]
MLDAFSKVVAQADARGEFLSNTQLDALSKMVADGNKRLDATAAISANAATIVTNAARSLF
SEQPQLIQPGGNAYTNRRMAACLRDMEIILRYVSYATIAGDSSVLDDRCLNGLRETYQAL
GVPGASVALAVEKMKEAAIAFANDSSNVTIGDCSALISEIATYFDRAAKAVV
>gcaA [gene=gcaA] [prot=L-glutamine-D-fructose-6-phosphate amidotransferase]
MCGIIGYVGEGSCRDVLINGLDKLSYRGYDSAGIAFIKNSKINVVRSKGRIEKLKEKIND
NFQKFEIGNIGIGHTRWATHGEPTEINAHPHLDAEGQFAVVQNGVIENYVQLKNYLTVNG
TYFLSDTDAEVIPHLIAYKQKHLKLQIVEAILCALSELKGNFSTVIIARDMPDSIFVYQN
KTALTLGKGSNFYSVSSDPIALIPYTKNFIQLHDRELGIISISQLAIYNKGKFTYPSRRF
KANLNDLITNKASFDSYTLKEIHDQKKVLRNLIISTLQSEKSIDESGQLHLEYKKIKNFQ
IIACGSSFNAALVGKVILEKLIRIPVHVYYGSEFKTNLPPLLPCTLTIAVSQSGETGDML
SAIEIEKSRRKFQNTVYKPYLLSITNKNYSSITKKTAQSIDLKAGIEIGVAATKTFTAQT
LSFYLLALKLAEHKFTLRKKEINKHLDEIRNLPKAIAHLLIKDESSIKWLSKQLKEISKC
FYIGKGLNLGSALEGALKLKEISYIHCDGYAAGEIKHGPIALVENNTLIITITDPEQSQE
STFASSQEAKARGAVLLAITHIEDSSIYQTFDFIIKIPKISQICASITSSVSLQLFAYYM
AYYKGNDIDKPRNLAKSVTVE
>ycf61 [gene=ycf61] homologous to orf75 in Porphyra purpurea
MVDKRNHYFLLHKIEELLELSASKYKTTMEIANYAKKTKNRNANKSNIKPVILAILEISG
ELKLNDINKLTN
>gltB [gene=gltB] [prot=glutamate synthase (GOGAT)]
MISISKRTSIARINLSEFHTISKIDRYPWLNKEKDACGVGFIAHLDNKFGHKLMMNALEA
LATMEHRGACSADEESGDGAGILFSIPWKFFVEWSLRYKQFKINISQAAVAMLFLPCLSS
DIQVSKNIVEEIFQDEDFIVIGWREVPYVKEVLGPLALRNMPQIYQIVVQSKRYQGRSLD
FHLYRVRRKIEKEITVRAYSWAKDFYFCSCSNHTIVYKGMVKSTSLGQFYQDLYNPDFEI
SFAVFHRRFSTNTMPRWPLAQPMRILGHNGEINTLLGNLKWMEARESSLNHPTLNEVASI
GPVVNVSNSDSANLDSVVELFLHVGHSCPEALMFLIPEAYENNPKLKYHQNLISFYEYCA
GFQEAWDGPALIVFSDGHTVGASLDRNGLRPARYCVTEDNVLILASEGGVLNLDPSLIRL
KGRLGPGEMIVLDLQEKLLMSNLEIKNKIASLRPYSDWIKQNRQVLIPTSFLTSTTLPLQ
EVFKRQTCFGYTSEDIELVIENMAIQGKEPTFCMGDDTPLAVLSGKSHVLYDYFKQRFAQ
VTNPPIDSLRESLVMSISSYLGSKTNSFEESSEKILKIKTPILSENDLVLIKNSELLTET
LVTTFEAHFDSPQANGQSLFSTINQLCKQAKNLIQAGTKIIILSDKVCFESRTESYIPPL
LVVGSLHQYLIKQGVRQKVSLIVETGQCWSTHHFACLLGYGASAVCPYLALETVRHWWMS
ERTQNLMSKGKMPNLTLIEVQNNYCKSVERGLLKILSKMGISLLTSYIGAQIFEILGLGK
EVVDLAFEGTVSRIGGLSFADLAMETIDLCSAGFSKLNKKKLDNHGFVQYRPGGEYHLNN
PMSKALHKAVRENNYTLYEAYKQLLANRPPTNIRDLLEFNFRSCSVPLEKVENIFEITKR
FCTGGMSLGALSREAHETLSIAMNRIGGKSNSGEGGEDSLRFTVLTDVDETGNSPSFPHL
KGLKNGDSLSSAIKQIASGRFGVTPEYLVNAKQLEIKISQGAKPGEGGQLPGKKVSPYIA
TLRACKPGVTLISPPPHHDIYSIEDLAQLIFDLHQVNPECKVSVKLVSEIGVGTIAVGVA
KAGAEIIQISGHDGGTGASPLSSIKHAGVPWELGLHEVHCLLVENNLREKVILRVDGGLR
TGQDVVMAALLGADEYGFGTIAMIAGGCIMARVCHTNSCPVGVATQKEELRMRYPGVPEN
VVNYFIFLAEEIRVILSKLGFETLSQIIGRKDLINHNFDKKLCKTHCIDTSIFFNIKTNE
YNFLEIPGGHSKKLKTSLLDYELLNSSDILYAIDNHKTLEKHIKISNSDRSVGAKLAGRL
AKQYKNEGFRGSLILNFYGTAGQSFGSFNIKGVTLRLIGEANDYVGKSMSGGEIVIVPPS
EVAFDASEQVILGNTCLYGATGGFLFAYGAAGERFAVRNSNAFSVLEGVGDHACEYMTGG
RVVVLGKAGRNIAAGMTGGIAYFLDEYSNLPEKVNLDIVRIQRVVTNEARKQLIQLIEKH
VLKTGSKKAVLILQQWEIFIHYFWQIVPPSESETSETNYFVENKVLAN
>psaC [gene=psaC] [prot=Photosystem I iron-sulfur center (subunit VII)]
MVHVVKIYDTCIGCTQCVRACPCDVLEMVPWDGCKASQIASSPRTEDCIGCKRCETACPT
DFLSIRVYLGAETSRSMGLTY
>ycf23 [gene=ycf23] homologous to ycf23 in Porphyra purpurea
MVNKSQVLLDIANKKAIKVISGLTNLNYEHVLTIARASQRACVSYIDIAADPQLVKVVKA
NVNIPICVSGLEIQPIYNAVLAGADLIEVGNYESLYKRNTVLSVCKIITLVEEIKKLCPR
VPLTVTIPYILNQKDQINLCKQLESLRVDYIQTEGNSISKCKNHCVQDLLRLSLQTLACT
YELVKHTQLPIICSSGLSDVTVPLAFSLGASGIGIGKFVTSYYEEEKIVSILSKIKKIVS
GTRSYQACE
>accA [gene=accA] [prot=acetyl-CoA carboxylase carboxytransferase alpha subunit]
MKMLDKTLPLEELESSLTKTESKAYYLSKLVYRHDKVVNNKAHILQRKLLNLKKQLFYGL
TSYQKLCVARHKRRPTTLDYIEYLLDSWIELHGDRRGSDDPAIITGIGRIGRRSVVVLGQ
QKGRNTKENVLRNFGMSSPGGYRKALRVMEHANKFKLPILTFIDTPGALAGVSAEKSGQA
EAIATNLKKMFSFEVPIISTIIGEGGSGGALGICIGNYVMMFENSIYTVATPEACSSILW
KDSTKAADAAEALKVRAEDLLTLKIIDEIIPEPFGVAHDYPLLMVRILKNKIRDQLDFFD
TFSPSELKHHRYLKFRKLGLYYDC
>psaK [gene=psaK] [prot=Photosystem I reaction centre subunit X]
MLASYLNLFNTPWNSSISIIMILSNIMAIVVGRYSIKVRGLKPPIAISQLKDFGVPELLA
TMSLGHIIGVGSTIGLKTLNFITY
>ycf5 [gene=ycf5] homologous to ycf5 in Porphyra purpurea
MEQYILKLENSINILAFLGALVSSLFYWAKLTYYKQIQVFSLPKFCLIFSNCIIAGMLLE
RCFRYSYFPLSNLYESLLFLSWVLNIITIIFVDKLSIIGAIGSSAVTLIIGYANYILPPS
LRQTSILAPALRSNWLMMHVSVMIFSYGLLIMGAFLSLIYVIVNNNLSQKSLNRMFYLPS
FYVDFDKNEPRNDIGTATINRNKLSYETIESLSYKFISLGFISLTLGIISGSVWANEAWG
NYWSWDPKETWALITWLVFATYVHIRNKKWNKIYASLVASLGLIVICFVTWE
>nblA [gene=nblA] homologous to ycf18 in Porphyra purpurea
MQSLTLEQEFKLKVYKENLKKLTLKQSQKHLVEVLKQMMLKDNIIKYLIRNSYF
>cpcG [gene=cpcG] [prot=Phycobilisome rod-core linker polypeptide]
MAIPLLYYPYSSQNHRVNSFEIKGNDEQPRIFSTDSLPTSSEMDEIIWAAYRQIFSEHQI
LKFNRDTYLESQLRFNQITVREFIRGLLLSERFRILNYDVNNNYRFSEMCVQRVLGRDIY
NDKEKIAWSIVLCTRGIKAFVDSLVNSKEYEENFGDNTVPYQKRRVIFQRSKGEVPFNLK
TPRYGSDFKERLGMPQYAWQGAIRTFRPQEIKPRPGDPVLYLDMSRELLFSRFR
>lipB [gene=lipB] [prot=Lipoate biosynthesis protein B]
MMLIIRYGLLNFETSWVHQKTMVFIQIRKRQKKKLSIYLKHPQVYTLGHRANKEYISFCS
NNTLVNLHRVDRGGEVTYHDYGQVIIYNITHLQKINRNVNIYIANLEQLGKRILLLYKTK
STKKEKFPGIWIQQKKIVALGIKIIQRTTFHGLSINFSCSKRNYELILACGIKDGISVNF
NEIHKKNSQNQFYWKYKIVLLIVDILAFNNIISF
>ycf20 [gene=ycf20] homologous to ycf20 in Porphyra purpurea
TRVIKQINKTILATCSFIFLFGFFLSSATSTILIQTNEWSILTAAILISIVELFNYLKHK
FQFNDRKSGYNCFFFINLAKLGLLYGLFIDAFKLGS
>apcF [gene=apcF] [prot=allophycocyanin beta 18 chain]
MQLQDSIVNIISTYDNAGKYLDSNAITNIKKYFDTADTRLGIVKIINANSSLIIQQASSQ
LFERNPELIRPSGNAYTTRRYAACLRDIDYYLRYASYSIVANDTSVLSSRVLAGLKDTYN
SLGVPLASIVTLLELLKELIKEKTKNINDAHKYIDEPFLYMMKILCENDV
>psbA [gene=psbA] [prot=Photosystem II Q(b) protein (D1)]
MTVTLERRESTSLWERFCSWITSTENRLYIGWFGVLMIPCLLTATTVFIIAFIAAPPVDI
DGIREPVSGSLLYGNNIITGAVVPTSNAIGLHLYPIWEAASLDEWLYNGGPYQLVVLHFL
LGVAAYMGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
NFMLVFQAEHNILMHPFHMAGVAGVFGGALFSAMHGSLVTSSLIRETTENESPNYGYKLG
QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVVGIWLTSIGISTMAFNLNGL
NFNQSIVDSQGRVINTWADIINRANLGIEVMHERNAHNFPLDLADNSLLPVASSSPSINS
>rpl32 [gene=rpl32] [prot=50S ribosomal protein L32]
MAVPKKRTSKSKKKSRRSHWINKAKTRIRNFLNLAKSISNKKATSFAYSTIKN
>ycf32 [gene=ycf32] homologous to ycf32 in Porphyra purpurea
MDIRLIIVLMPILMAASWAIYNIGKALVGQFGKMLNE
>rbcR [gene=rbcR] homologous to ycf30 in Porphyra purpurea
MTDLPFTLDQLRILRAILIQGSFKKAATSLYISQPAVSSHVHNIEKQLNIQLFDRSHRNA
QLTEAGQLLLKYGGRILALCEETCRALEDLQNLQCGNLIIGASQTTGTYLMPKLIGLFRQ
KYPQISVQLQVHSTRRISWSVANGQLDLAIIGGEVPKELTEILEVRNFVEDELTLILPPS
HPFSKFSCIQKEDLYRLRFIALDKNSTIRKVIDKILNRNGIDSSRLKTEMELSSIEAIKN
AVQSGLGASFVSISAIDKELKLQLLNRVNIDKIKIKRMLSIITNYSRYRSKASETFCHEI
LGLLVNLPFKNAPSTEK
>desA [gene=desA] [prot=fatty-acid desaturase]
MTPIGLVRSFKTLTSRYLDNLTLVLFLIAMLLITISIFSYFILHLNSSICFLINLLSLHL
LGTVIHDSSHKAAHDNKYINYFIGHISAFFLGFSFPVFSRVHMQHHAYVNDANNDPDHFV
STAGPLWLIASRFFYHEVYFFQRKLWRNKELIEWIWARTLLICLLFIAFETNILEYVFKC
WFCPALVVGFALGLCFDYLPHYPFKYTDRWHNSCVYPSKFLNLAIFGQNYHLVHHLWPSA
PWYFYKEMYTRNRLFLQINQSPQSLAFSFSVKAMSKFLYDLFLGIKI
>ycf54 [gene=ycf54] homologous to orf108 in Porphyra purpurea
MKADYNTYYYIAASKHFLTQEEPLEEILREKTEHFIANNKSIDFWIFDSTKLNAHSPNEI
KTLQKTFFFPTILIISSNKKFITWLKLRLRYIFTDKIQLAIKL
>cobA [gene=cobA] [prot=urophorphyrin III methylase]
MTHNKTIKKVYIVGAGPGDPELLTLKAQRVLREADVVIYDALVNPEILQHCKPNAEIIKV
GKRRNNHSFSQLQIASLLIDRAKKGERVIRLKGGDPLIFGRLGEEILELFSKNIEIEIIP
GITSAFAVAADMKFPLTHRQLGSSITFLTGEEFYEKTTNKLKWERIIWGADTIIVYMILY
NLPKIIKKFLSVGYSAEKPIVLVQWASLKKKNFLIGTIGTIIHQVIESKFGPPSLAIIGE
VIEISSIIQKL
>ycf55 [gene=ycf55] homologous to orf320 in Porphyra purpurea
MRNNIKSDIWSFHNKFRFDKKIILLLIRVSIKFNTKLVNYSRRPLFLDLLSVLTKKILFS
LAVKSFKDTFITLKIRNCSSLFLKHNSLLVFNSIILKLLKNFYDVLGFSSYEEKKFLILF
QNESLYKLCAFEFRDLTEIVFTFIIFGEIHDKDYSGKVCSNELNFRCLENFLIRVCDCVV
YFSIKYNYNSSILYALRGHSWIKSFKDKQRLFIYLLLSSYFHSIIDTTQKLNNSIFRGWI
VRGTYIDSISFEQFSLTSLKKLPKISLLVFLLINVIDTVIPQFNLFILFLRKAITFIFSD
LIIKTNLL
>ycf53 [gene=ycf53] homologous to orf238 in Porphyra purpurea
MNRIRFISLILNLDSCDSNIQEYSRLAYVHDLNKLMDENFVSLLLIILKLAKNSKRLQPT
YHNVYLFNLLKSYALSEIDGYVLGHFSRGFVNTLMHYKNAQYETLESLLSANNFFEANKF
TQQILLELAGEQSKQRNWMYFTDVHSINHQSVSDLNHLWELYSQGNFGFSIQKRIWISVN
KNWKKFWKKIGWINSNSKWLKYPGEFMWAVNAPPGHLPLFNQLRGVYVLEFIFDYYL
>carA [gene=carA] [prot=carbamoyl phosphate synthase small subunit]
MEKFKLLKLGKPATLLLEDGTVFRGKSFSNPQTVTGEIVFNTGMTGYQEIFTDPSYNEQL
VVLTYPEIGNTGTNLDDYESLKIQAKGIILKNLSNAYSNFRAMRSLLSFLKRHKVVEIHD
IDTRALVLHIRNNKTMLAVISNETYNLTFKEAKATIKYGKHTLNSNLASRVSTSLDYYQW
MQPLNRKLKFGYSIIRSFNSAINKKLHTSKKLRIIVLDLGVKFNILRYLKSFECEVIIVN
YKSTYQQVMKFHPDGIVISNGPGDPAKINRVVVRVNKFINKKIPILGICLGHQILARCFE
AKTFKLKFGHRGLNHPVGINKRMEITSQNHGFAVNFEFLKSNKFYANHLNLNDGTLAGIS
SQNFPLISVQYHPEGSPGPHDSNYLFKYWVYIIYKSKSS
>rpl27 [gene=rpl27] [prot=50S ribosomal protein L27]
MAHKKGSGSSKNGRDSNAKYLGIKKFGKQIVTPGQIIVRQRGTKIKPGLNVGLGRDYTIF
SMIAGRVNYSTQKNKKIVSVDPSYGKIQAIEIRKASHFAT
>rpl21 [gene=rpl21] [prot=50S ribosomal protein L21]
MTNYAIVKASGRQLWFEPGKYYNINYVHANPGDKIIFYKVLLLKNTNSLLIGKPFVEKVE
VHATILQHLKDKKITVFKMQAKKGTKKKKGYKTVLTKIKINCIHNHKK
>ycf39 [gene=ycf39] homologous to ycf39 in Porphyra purpurea
MSLLVIGATSTLGRQIVKKALIQGYEVKCLVRNSKKAAFLKAWGAILVYGDLMVPETLPQ
CFVGASVIIDVSTVKVKDLNNDYTVDIYCKRAVLEAAIQAKVKKFVSFSMFNSSQYLDVP
STKIKSDFDRALIKSGINYLIFTPLGFFQDLTSQYAAPILSSQPVFILEQSESVQISYID
ARDAANIVLAATSLAFLKNIDFPLIGNRSWNNVSIISLCQLYAGQASPVVTVPLLLVYFI
RRILGFFAFTRQFYFYLTLVENLSRSSYLSFNHENENKFLKIYQKKLFSLEKYFQYYFTH
KLGNLKKQINNF
>psbI [gene=psbI] [prot=Photosystem II protein I]
MFTLKIFVYSCVAFFCSLFIFGFLSNDPSRNPNRKDLE
>ycf58 [gene=ycf58] homologous to orf149 in Porphyra purpurea
MRLRNILEQYEGMWYIMCNQCYTRYNKINRKNGEIKIRLKKSKSTINSFSILTTNYPKLN
RGAGKDFTLFLSNLNSNLTMVLKQASKSKLISMGSCEWRDKNIVHIRMYYRDLVLQETIF
LTNNNLSFSILITKSKKKVLNVTFSSWIRLKSKTTLNPCD
>ccrf1 [gene=ccrf1] weak homology to RAP1 in Plasmodium falciparum
MIIMNIQHHLNSCIAYIEHRCSKGNHHAENRIRLSPEIFNAYCSKKIVIKSSINKCTIKK
VYKNSTINQLENITYNIDKKKLKLLLRKIGDLGYFTKVSISNYYYPRQEVIKIHLSPNKI
LKTIKTKKKFFIPCQDIKSIFEKQFDHPKNIKHLLHSYQNLAEWHLKRNINFVQIYIEEN
LKKDTQTKNFSIKTLGNKNIKWIYNTSIDTCPKNNTDKKKSASIINPPLTLKKIRNRLKQ
EPSLEHEYKIIQVESSEQILLLVDISNLDRNIYSFVWINKLNTQLWDNYIKEIKTINCKN
KNWNSLNSTREDKKSPKQKNRNVFFKKLFHCFESSKIYKTPKLYDFKQFNQVKLKYDNLK
GRKHKIDFVVKTTNNGLFINLKEISPWEPKISHGDYYLQKEFYRRINYLVSNYELFASNS
LHKHYSYSSFIEKGTSYHLSRRLYPNLIISTDFKLIETFAESIFLIKNPYINFHKRLSKS
AKIEKNREEKLCTTTLEVNKKHKMILLETGISKQDDKVKINNILNPNSKLSLKITNILLA
SNAFLRTFFIQIQAQYVKVIKLRQFNYYYFDKIETGEATVKINYVPKDINFIENILTNPQ
AIRSKTILNRRISTPSYQCKSSIEYYLQLNENLNSIFFLLNYTTKLNQFRHLKPTYPIKD
SLLRKVDYLNEISMGIGAQTFDEEDKASVLRLEYCLSNSKGFFLTFKLLSIT
>ycf10 [gene=ycf10] homologous to ycf10 in Porphyra purpurea
MKNWKFNKINYPTFEKSGAIPRSITKTFEKLKKELNPHSESEIIEEFTISRYQTIASLRY
LIVLVVFPVVVHQVSKNFIIGPAVDYFWKYNQIDVFLNSSQEERAFAELQRFEEKIHFEM
LIGTKQSVSQQSLEASIKQKAVEIADHYTYESLHAIKNILADSISISVFILLIVLGKRQT
FVLKSFLNEIVYGLSDTAKAFLIILFTDMFIGFHSPHGWEVVIESLLRHFGLPENRDFIF
LFIATFPVSLDTVFKYWIFRYLNQVSPSAVATYHNMNE
>psaL [gene=psaL] [prot=Photosystem I reaction centre subunit XI]
MINYIKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIG
PFYKLGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENNDKLQTANGWRQLA
SGFLLGAVGGAGFAYILLANNLLSTSTPILQT
>ycf49 [gene=ycf49] homologous to sll0608 in Synechocystis sp.
MYSLSLPTWNIHIVTLVEWSIVIRLIYLFTYFYDIPRSFNFLIIILMIFFFLSGLFACCW
HFFNNNSILLWISVAQAALTAFSNFFFLLFISAYYHK
>ycf4 [gene=ycf4] homologous to ycf4 in Porphyra purpurea
MKKIKRDKIVGAGKISNYLLLIIMLGGGISFFIVGFLSYFKAFEHIALFSRFVNSDIRFI
PQGITMIFYGTMAICLSIYIYFSIYYDIGAGYNEFNLISKKVVVFRKGFPGKNRLIKFVL
PIPHLKSVKVMARGGINPKYEVFLYTKNLSRIPIGQVFKLSKLEYQASEIATFLGLAFEQ
YNL
>psbE [gene=psbE] [prot= Cytochrome b559 alpha chain]
MSGGSTGERPFSDIITSVRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGTPRPNEYFSEN
RQQVPLINDRFNAREELDDLTSNL
>psbF [gene=psbF] [prot=Cytochrome b559 beta chain]
MANKPLQPISYPIFTFRWLAIHGLAIPTVFFFGAITAMQFIQR
>psbL [gene=psbL] [prot=Photosystem II protein L]
MSGINPNKQPVELNRTSLFWGLLLIFVLAVLFSSYFFN
>psbJ [gene=psbJ] [prot=Photosystem II protein J]
MNSTGRIPLWLVVTFGGIVVLTVLGIFIYGSYSGLGSSL
>psaI [gene=psaI] [prot=Photosystem I reaction centre subunit VIII]
MAISYLPAILVPVIGLVMPIFCIVFLFLYIEKESLN
>ftrB [gene=ftrB] [prot=ferredoxin-thioredoxin reductase beta subunit]
MRKTPKNLESLHKFAEAYAKLSRTYFCIDQSITALVIEGLARHKDDYGAPLCPCRHYENK
KTEVLAAYWNCPCVPMRERKECHCMLFLQPSNEFSGESQLISKDDLQKHLS
>atpA [gene=atpA] [prot=ATP synthase CF1 alpha chain]
MSNIRPDEISSILKQQIERYNESVKIENTGTVLQVGDGIARIYGLDNIMAGELLEFEEKT
IGIALNLETDNVGAVLMGDGRDILEGSSVKGTGKIAQIGVGDNLLGRVLNALGNPIDGKP
NPNSTDYRLIEFNAPGIVSRRSVCEPIQTGITAIDAMIPIGRGQRELIIGDRQTGKTSIA
LDTIINQKEENVICIYVAIGQKASSVAQAVTLLEEKDALKYTVVIAANANEPATLQYIAP
YTGAAIAEHFMYKGLATLIIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLE
RAAKLNNELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPSINV
GISVSRVGSAAQIKAMKQVAGKLKLELAQFDELQAFSQFASDLDKSTQAQLARGQRLREL
LKQPQASPISVYEQIPMIYAGINGFLDDIKIDRISLFIKKLQECLSNSYPHFYEAIKESK
QLSKENEEVLKKAITEVKKNLSFI
>atpD [gene=atpD] [prot=ATP synthase CF1 delta chain]
MILLLTNSKIIYPYSEALFSIAKDQEKFEVIKNDMELFVTFTKNLNGFKKFLETPLINKN
KKIKVVKDVFSKILNSTTLNFISILINKNRIMFVSNISEKYNQLVLKDKSVKLVKIACAR
QLSEKQAQALSEVLKHKFKCLSVKLIFNIEPELIAGFKIFIESQVIDVSLQGELKEFEWY
LTK
>atpF [gene=atpF] [prot=ATP synthase CF0 B chain (subunit I)]
MRSQSLNFVASNTTSDFISNLLESNVINIIILISLLIYLGKRTIVTNLNDRKLNIQCSIL
EAEKKLSQAQLRLAEAEKKITESEEIISILKHEAKIAANKIKELIVNNAKRKIDKIILDG
KTIIANTEIEIMNQIKNRIISTAIDKTKIKLTKNLQAETIERITDNKITFLNNNL
>atpG [gene=atpG] [prot=ATP synthase CF0 B' chain (subunit II)]
MQDILNIYLSSEESGGLFDFDATLPLMASQFLLIMLILDITFYKPINKVLKDRENYILKT
LESATQISEKTKETLARYEEVILKSKKESQQLIDSIKTKTEHDIVNELIQTQNSTREFIS
KSIKELYRKKEQTLKVLEEDTENLSDKIYLKLINPKQ
>atpH [gene=atpH] [prot=ATP synthase CF0 C chain (lipid-binding) (subunit III)]
MDPIISAASVIAAGLAVGLAAIGPGIGQGSAAANAVEGLARQPEAEGKIRGTLLLSLAFM
ESLTIYGLVVALSLLFANPFIK
>atpI [gene=atpI] [prot=ATP synthase CF0 A chain (subunit IV)]
MISNNLEICSIDIGVHWYWNFLGLKIHGQVLLVSWVAIIILLLLAILGTFNMQKEPRGFQ
NFLEYVFEFLQDISKNQIEEKYYKSWVPFISTLFLFIFVSNWLGALVPWKLIKIPEGELA
APTNDINTTVALAMLTSVSYFYAGLSKKGLRYFLKYISPTPILLPINILEDFTKPLSLSF
RLFGNIVADELVVAVFNLLFPLFLPLPVMVLGLFASSIQALIFATLSASYIGESLADHH
>tsf [gene=tsf] [prot=elongation factor Ts]
MSNKSSKTSKVSIDLIKQLREKTGVSIKDCKEALRKHDGDIAKALREIQEQGSAIAQEKH
NRITVHGRIASYIHINNRMGSLVEINCETDSAANSEEFAKLCQHIAMQIVACPEIKYVKF
EDIPEEIKNHYIEVESQSKDLQDKPAQSKNKIIRGRIDKKLRRMCLLDQANIKDDKVTVN
DLIKEKINKFKENIQINRFARFTIGEKI
>rps2 [gene=rps2] [prot=30S ribosomal protein S2]
METSLSELLDASAHIGHSTSKWNPKFFPFIHMTKKGIHIIDLIKTIQQISVACMFLKKEV
RNGKRVLFVGTKNQASKVVEREAKKCQEFYINQRWPGGLLTNWPTIKLSLKKLQLLEEKE
KLDHLGSTSKKEEASMKREIQKLNKYLNGIKGMKKPPDIIILVDPSREKTTISECQKLNI
PTIGILDTNCNPKSVNVPIPANDDSIKAIDLIVSKLSTSIFKAKLENNQFIENSTENLNE
HVK
>rpoC2 [gene=rpoC2] [prot=DNA-directed RNA polymerase beta]
MVIDKKKVKNRTPYFLNRIIEKSELREIIEVVFHKNGIAKASLIADNLKEIGFGFATKAG
ISISIEDLKIPPNKSRILQITNQELRKTEISFKRAEITTIEKSQKSTDTWNNASEALKDE
IIKYYRLTDPLNPVYMMAFSGARGNLSQVKQLVGMRGLMADPNGQIIELPILSNFREGLN
VTEYLISSYGARKGLVDTSLRTADSGYLTRRLVDVAQDIIVREIDCKTNNGITFSNIQNN
EKIIIPLYKRLIGRILADDVKNPITPQVNIASKNTLITGNLIKEFKKNNIQKIKLRSPLT
CQSYRSICQKCYGASLSDGKLVDIGEAIGIIAAQSIGEPGTQLTMRTFHTGGVFTAEFSK
PIKTLFEGVIKYPSNLKFHHVRTRHGDDAIIIEKSATFDIRTTQSERKITLETGTTLLVK
DNSFIKKNQVIAETSTSGRLITEKSTKDLISNSAGEIYFSDITIEERVDRHGNLTKISKQ
HGLIWILSGEVYNFPMGANLVVQNSFEVNKGCLLAKALIKSRHSGISRIRCAANYYAIDI
ILGTVTIRNANLYKDSKLFNNNYLLKTSNKKNFVVKALVGQKLSHSDIIAELIDDQYLTN
TGGIVKYVNLKLAKTHKDDSEYTLSGIGYIFFIPQETHQINKDASILLANSGDYVNKNTE
IAKGVFCKCSGLLEIIKSNNIIKEIIIKPGVVYPVSNNLSTFTNKIFYPGEKIIDNIVTN
KIVYVEHIKLINKSCILIRPVNQYKVSNTESLFDFVTKGENKDLISLKVVNKSFFKDGEV
IKSVKGVSLVNIQLIFYTKPSATAVTTKMEFVKDLDKSTNSTSEIKLRITATETTKIKYK
QQKNIISQILIKEGQYITKDFPIIETLFLSRHDGRVVIKSNFKQKNNACLIIISPSNKKE
IYINKKEHKLKIGDFIRVGDHLGTNKNFKSPYSGEVLDINDKLITIRIAEPYLISPGTLI
HVNHGELIRKGDYLALLVFDKIKTGDIIQGLPRIEEILEARKPRETCHLAKFDGKIYVHY
NDKGESLISLESQKKEKYVYILRLNQRVLVQSGTEVTIGEPITDGLINPHEMLEIFFEYF
LTQTSPIQATKASFEKIRLELLKEIQQVYQSQKIEINDKHIEVIIRQMTSKVLIQERGDT
TLFPGELVTINQIEKINSAIIAVNKKEAKYKPVLLGITKASLNTDSFISAASFQETTRIL
TEAAIEGKVDWLKGLKENVIIGRLIPGGTGLISLDNKDSIKMRLALRHKKNFLNKTFKKK
NNKFLNKTY
>rpoC1 [gene=rpoC1] [prot=DNA-directed RNA polymerase beta' chain]
MVSHQFLPYLDYIKICLASPERIRVWAQRILPNGQIVGEVTKPETINYRTLKPEMDGLFC
ERIFGPIKNWECHCGKYKRIKDKGIICERCGVEVTESKVRRHRMGYIELSAPVVHIWYLK
GMPSYISVFLDMAAKEIEQVVYFNTYIITHSTAENKQIKYKQLLTEDEWVLIEDQIYRNE
IQGEIEIGIGASAILKMLKDLDLSLESDLLRTKLVNLKAVKKDKIMKRLRIIDNFMVTGA
SPSWMVLNVIPVISPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLEEILAPEIII
RNEKRMLQEAVDALIDNGRRGRVVVGANNRALKSLSNIIEGKQGRFRQNLLGKRVDYSGR
SVIVVGPDLKLNECGIPKEMAIELFQPFLIHQIIKEGLANNMKSAKKLMQKHTSVTIELL
QKIIKWHPVLLNRAPTLHRLGIQAFDPVLVDGRAIRLHPLVCPAFNADFDGDQMAVHIPL
SIEAQTEARLLMLAPNNFLSPATGQPIITPSQDMVLGCYYLTNNNLANQKGSGHYFSSFE
DAIIAYKQKLISLHAFIWVKFYGTINNLDIGRFIKSTLCKNKLTTTDYYENLQVKKDIEG
TITCQFIKTSVGRIFFNIAISGNLFFSTSNHNK
>rpoB [gene=rpoB] [prot=DNA-directed RNA polymerase beta chain]
MKKNQFANKLIVIDLLSVQRESFYSFLTEGLAKELNNFSPIIDYTGKLELHLVTNQLVIK
KPKFSFEEAKRRDCSYTISINIVTQLFNKNSGDVKEQEILLGEIPLMTQKGTFVINGAER
VIVNQIVRSPGIYFNSEMDKNNLKTFNFLIIPNRGAWLKCEIDKNDLIWIRIDKNKKINL
SIFFKALGIDHDDLRIKNAFRQPEFIYKNLNKDENYTQQEALEELHKKLFPGEPATSEAS
TKILYFKFFNPKKYDLGIVGRKKINKKLDLNSPENIRILTIQDILSGINYLINLKFGFGN
IDDIDHLANRRLKSVGELLQSQISIGLIRLERLIKERMTICEQSSLVPSALINPKPIFAA
IKEFFNSSQLSQFMDQVNPLAELTHKRRVSSLGPGGLSKERAGFAVRDIHPSHYGRICPI
ETPEGPNAGLIGSLAIYARINPDGFIEAPFYKVNQGQVLKNKGIIYLDAEQEDEFKIAPG
DIRINETNFIKEINVPVRYRQEFTQCPAEEIDFIAVSPIQVISAATSLIPFLEHNDANRA
LMGSNMQRQAVPLIFPERPLVGTGLEAQIAKDSGIMAISRSNGIVKFTSAEKIIVTDSSN
NQITYNLQKYQKSNQETCINHRPIVWPGERIKKGQILADGSATDTGELALGRDVLVAYMP
WEGYNYEDAFLISDRLVYEDLYTSIHIEKYEIEARQTKLGPEEITRNIPNVGENSLKQLD
ENGIVVVSSFVESGSILVGKVTPKGESDQPPESKLLQAIFGEKNKDVKDTSLRLPNGTRG
RVVDVRIFSREKGDELAVGINYIVRIYVAQKRKIQIGDKMAGRHGNKGIISKILPRQDMP
YLPNGTPVDIILNPLGVPSRMNVGQIFECILGISAFNLKKRFRILPFDEMYESDSSRILI
NQKLKEAQTLTNLDYLFNENHLGKVALFDGRSGEKFDNPVLVGKIYMMKLVHLVDDKIHS
RSTGPYSLVTQQPLGGKAQQGGQRLGEMEVWAFEAFGAAYALQELLTIKSDDIQGRNEAL
TAIVRGKTIPKPGTPESLKVLMREIQSLGLDIAAYRLPNLHHGEIKSIEIDLTHNKIVQK
R
>ccrf11 [gene=ccrf11]
MIFQFQIIYFKIDSIANKLDRSSLMNYFKEDLSGIIIKFGYLVIL
>rps20 [gene=rps20] [prot=30S ribosomal protein S20]
VANSKSAKKNIKITERNKVLNQINVSCIKALTKKYLRQINNDSFESNLLNTLYSKIDKAA
KMNVFHKNKANRLKSKLIKKLSGTNAYKITR
>glnB [gene=glnB] [prot=nitrogen regulatory protein PII]
MFSKLEAIIRPFKLEEVKVRLMTFGVPGITVTNVMGCGKQIGGIERSKGVEYDSELIEKV
KIEIVVMNEHIDELIEIIINAVWTGEIGDGKIFVSPVSSVIRIRTQDKDLDAI
>rpl33 [gene=rpl33] [prot=50S ribosomal protein L33]
MVKHKAARICINLECIDCKSNLHKRSNGISRYTTIKNRKNNPSRMELKKFCPYCNMRTIH
KEIK
>rps18 [gene=rps18] [prot=30S ribosomal protein S18]
MNKKIKIPKDSKAINYKTTDLIREFISDRGKIIPQRITKSTRKKHKLIEKAIKQARLIGL
MPFKQKNW
>atpE [gene=atpE] [prot=ATP synthase CF1 epsilon chain]
MALTVKVITPDRVVWKKTVEEIILPSSTGQLGILMNHAPLLTALDIGVMRARMVNTWVPL
VLLGGFAQIDNNLVTIIVSDAEEVKAIDEEEANKLLAASLANMEKAQSNREKIESMQNLR
RARARMQAILSLK
>atpB [gene=atpB] [prot=ATP synthase CF1 beta chain]
MKPCQLKQKQKTLAIAKVNNKGKVIQIIGPVLDIVFPDGQLPKVFNAIKINNSNNNWITC
EVQQLLGDNKVRAVAMSTTEGLKRGASAIDTGEPISIPVGKETLGRIFNVLGEPIDEKGP
VISNDKLPIHRPAPKFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIM
ELINNVAKAHGGVSVFGGVGERTREGNDLYQEMKESGVINEKDLNLSKVALCYGQMNEPP
GARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLG
TEMGALQERITSTLDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYP
AVDPLDSTSTMLQPGIVSDEHYTTARKVKETLQRYKELQDIIAILGLDELSEEDRLIVSR
ARKIEKFLSQPFFVAEVFTGISGKYVSLSDSIKGFNMILSGEVDNIPEQAFYLVGRIEEA
IDKAKQVEKS
>ycf3 [gene=ycf3] homologous to ycf3 in Porphyra purpurea
MPRSQKNDNFIDKTFSIIADLIVKILPTNKESKEAFYYYKDGMAAQSEGEYAEALACYYQ
ALKIEKDPMDKSFILYNIGLIQASNGQHARALEYYHESLKFNPNLVQALNNIAVIYHYYG
NKLFEQSKLQEAKLMFDKASNYWRKAIKLAPYNYIEAQNWLKITGRITEDIML
>ccrf10 [gene=ccrf10]
MTKLKSLLNDKKLTLISCLNKTIYDIN
>ccrf9 [gene=ccrf9]
MNNCLPKNKVFKILNFFKCIDPMCTDNLFKFPLYKLNKNKGKFTNKFYKNTKNKKYIDIW
LIFYIYYHIYLRIGKNQTKDLQITKC
>ycf19 [gene=ycf19] homologous to ycf19 in Porphyra purpurea
MKDGTDLILETTIAFLQIYIVLILLRMSLGWFPNINWYSQPFYSLSQLSDPYLNLFHGVF
PSFLGIDFSPIIGITLIDFIIELLSRQLKPL
>psbC [gene=psbC] [prot=Photosystem II 44 Kd apoprotein]
MLFNKDKNNIGGRSIESTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWTGAMTLFETS
HFIPEKPLYEQGMILLPHLATLGWGVAPGGEIVNTYPYFATGVIHLVSSAVLGFGGIYHS
IVGPDVLEDSFSFFGYDWRDKNKMTTILGIHLILLGIGAFLLVIKALFIGGIYDTWAPGG
GDIRFITNPTLNPAIIFSYLLKSPFGGEGWIVGVNNMEDVIGGHIWIGVTCVIGGIWHIL
TRPFSWARRAFVWSGEAYLSYSLGALALMGQTAAEYAWYNNTVYPSEFYGPTAAEASQAQ
AFTFLVRDQRLGANIASTQGPTGLGKYLMRSPTGEVILGGETMRFWDLRAPWLEPLRSSN
GLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNYVSPRSWLTTSHFFL
GFFIFIGHLWHAGRARAAAAGFEKGINRENEPVLSMRPLD
>psbD [gene=psbD] [prot=Photosystem II D2 protein]
MTIAIGREQERGWFDLLDDWLKRDRFVFIGWSGILLFPCAYLALGAWFTGTTFVSSWYTH
GLASSYLEGCNFLTAAVSSPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWTFTALHGSFG
LIGFCLRQFEIARLVGLRPYNAIAFSGPIAVFVSVFLLYPLGQASWFFAPSFGVAAIFRF
LLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGEASDTFRAFTPTQSE
ETYSMVTANRFWSQIFGVAFANKRWLHFFLLFVPVTGLWVSSIGIVGLALNLRAYDFVSQ
EIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENFVFPEEVLPRGNAL